RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SLFN14P0C7P3 912 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 TFE3P19532 575 aaPredicted RBP7.03□□□□□ -1.28
VPS33B-203ENST00000554264 EPS15P42566 896 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 ASPAP45381 313 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 HMGN5P82970 282 aaKnown RBP7.03□□□□□ -1.28
VPS33B-203ENST00000554264 ID3Q02535 119 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 INPP5AQ14642 412 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 ZSCAN23Q3MJ62 389 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 CRY2Q49AN0 593 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 CST9Q5W186 159 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 LRSAM1Q6UWE0 723 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 AGMOQ6ZNB7 445 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 EZH1Q92800 747 aaPredicted RBP7.03□□□□□ -1.28
VPS33B-203ENST00000554264 NYXQ9GZU5 481 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 KCNF1Q9H3M0 494 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 ACSS3Q9H6R3 686 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 BABAM1Q9NWV8 329 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 HIF3AQ9Y2N7 669 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 SAMM50Q9Y512 469 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 USP16Q9Y5T5 823 aa7.03□□□□□ -1.28
VPS33B-203ENST00000554264 CACNA1SQ13698 1873 aa7.02□□□□□ -1.28
VPS33B-203ENST00000554264 SNED1Q8TER0 1413 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 AK9Q5TCS8 1911 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 DYNC1I1O14576 645 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 DYNC1LI2O43237 492 aaPredicted RBP7.02□□□□□ -1.29
VPS33B-203ENST00000554264 KCNQ3O43525 872 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 FSTP19883 344 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 PIP4K2AP48426 406 aaPredicted RBP7.02□□□□□ -1.29
VPS33B-203ENST00000554264 USP11P51784 963 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 LRRC14Q15048 493 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 SAPCD2Q86UD0 394 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 NIM1KQ8IY84 436 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 RPGRQ92834 1020 aaKnown RBP7.02□□□□□ -1.29
VPS33B-203ENST00000554264 TMX4Q9H1E5 349 aaPredicted RBP7.02□□□□□ -1.29
VPS33B-203ENST00000554264 VPS33BQ9H267 617 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 SEMA6CQ9H3T2 930 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 ADARB2Q9NS39 739 aaKnown RBP7.02□□□□□ -1.29
VPS33B-203ENST00000554264 LMBRD1Q9NUN5 540 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 ZKSCAN5Q9Y2L8 839 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 ATP6V1DQ9Y5K8 247 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 CSADQ9Y600 493 aa7.02□□□□□ -1.29
VPS33B-203ENST00000554264 RIC1Q4ADV7 1423 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 TRAF5O00463 557 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 HTATSF1O43719 755 aaKnown RBP7.01□□□□□ -1.29
VPS33B-203ENST00000554264 CELF2O95319 508 aaKnown RBP7.01□□□□□ -1.29
VPS33B-203ENST00000554264 GNAI3P08754 354 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 RAB6AP20340 208 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 HOXA10P31260 410 aaPredicted RBP7.01□□□□□ -1.29
VPS33B-203ENST00000554264 NTF4P34130 210 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 RING1Q06587 406 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 NOGQ13253 232 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 SEPT6Q14141 434 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 SEZ6L2Q6UXD5 910 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 C12orf40Q86WS4 652 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 GAS2L3Q86XJ1 694 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 PHC3Q8NDX5 983 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 RBM17Q96I25 401 aaKnown RBP7.01□□□□□ -1.29
VPS33B-203ENST00000554264 COPRSQ9NQ92 184 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 GPRC5DQ9NZD1 345 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 PCDHA4Q9UN74 947 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 LTBP1Q14766 1721 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 CDHR2Q9BYE9 1310 aa7.01□□□□□ -1.29
VPS33B-203ENST00000554264 SIPA1L3O60292 1781 aaPredicted RBP7□□□□□ -1.29
VPS33B-203ENST00000554264 FAM95CA0A1B0GW59 222 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 PRAMEF22A3QJZ6 481 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 DCDC2CA8MYV0 355 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 ERVV-1B6SEH8 477 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 CHL1O00533 1208 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 PPIP5K2O43314 1243 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 GSPT1P15170 499 aaKnown RBP7□□□□□ -1.29
VPS33B-203ENST00000554264 ADMP35318 185 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 RPS26P62854 115 aaKnown RBP7□□□□□ -1.29
VPS33B-203ENST00000554264 CUL4AQ13619 759 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 TTLL4Q14679 1199 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 RNF43Q68DV7 783 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 MCTP1Q6DN14 999 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 CIAPIN1Q6FI81 312 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 CEP85Q6P2H3 762 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 LRFN4Q6PJG9 635 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 SASS6Q6UVJ0 657 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 CDC37L1Q7L3B6 337 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 SIRT2Q8IXJ6 389 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 TMEM87AQ8NBN3 555 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 SUPT20HQ8NEM7 779 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 RTF1Q92541 710 aaKnown RBP7□□□□□ -1.29
VPS33B-203ENST00000554264 CRAMP1Q96RY5 1269 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 KIAA1522Q9P206 1035 aaPredicted RBP7□□□□□ -1.29
VPS33B-203ENST00000554264 PGAP2Q9UHJ9 254 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 HDAC5Q9UQL6 1122 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 COL4A5P29400 1685 aa7□□□□□ -1.29
VPS33B-203ENST00000554264 ABCC12Q96J65 1359 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 TRPM7Q96QT4 1865 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.99□□□□□ -1.29
VPS33B-203ENST00000554264 HCLS1P14317 486 aaPredicted RBP6.99□□□□□ -1.29
VPS33B-203ENST00000554264 ERVK-24P63145 666 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 KIAA2012Q0VF49 1180 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 NFIAQ12857 509 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 HLFQ16534 295 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 PPM1JQ5JR12 505 aa6.99□□□□□ -1.29
VPS33B-203ENST00000554264 SCARA3Q6AZY7 606 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms