RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 IWS1Q96ST2 819 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 MPHOSPH6Q99547 160 aaKnown RBP8.66□□□□□ -1.02
TDP1-209ENST00000554180 PDCD2LQ9BRP1 358 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 CSRNP2Q9H175 543 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 PXMP2Q9NR77 195 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 FAM13BQ9NYF5 915 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 ADD3Q9UEY8 706 aaKnown RBP8.66□□□□□ -1.02
TDP1-209ENST00000554180 HPSEQ9Y251 543 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 SMCHD1A6NHR9 2005 aa8.66□□□□□ -1.02
TDP1-209ENST00000554180 DNAJC25-GNG10A0A024R161 153 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 B4DLN1 442 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 FAM86B1E9PN63 330 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 MEIS1O00470 390 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 MAFGO15525 162 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 SLC26A4O43511 780 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 KINO60870 393 aaKnown RBP8.65□□□□□ -1.02
TDP1-209ENST00000554180 FAM86B2P0C5J1 330 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 FCER1AP12319 257 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 PFKFB1P16118 471 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 LIG1P18858 919 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 CCND2P30279 289 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 MAPK4P31152 587 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 TXLNAP40222 546 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 PDIA5Q14554 519 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 Q3C1V9 767 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 PRR16Q569H4 304 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 CCDC183Q5T5S1 534 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 ARHGEF16Q5VV41 709 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 CAVIN1Q6NZI2 390 aaKnown RBP8.65□□□□□ -1.02
TDP1-209ENST00000554180 ANKRD13CQ8N6S4 541 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 FAM133AQ8N9E0 248 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 ENGASEQ8NFI3 743 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 ETNPPLQ8TBG4 499 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 HAS1Q92839 578 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 TIGD1Q96MW7 591 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 CLIC6Q96NY7 704 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 TAAR1Q96RJ0 339 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 MXRA8Q9BRK3 442 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 GOLPH3LQ9H4A5 285 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 ZFYVE28Q9HCC9 887 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 DACT1Q9NYF0 836 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 UBIAD1Q9Y5Z9 338 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 STK24Q9Y6E0 443 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 MRVI1Q9Y6F6 885 aa8.65□□□□□ -1.02
TDP1-209ENST00000554180 MYH7BA7E2Y1 1941 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 A0A1B0GVL5 298 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 POTEB2H3BUK9 544 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 CA12O43570 354 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 MARCH6O60337 910 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 TLR2O60603 784 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 NR1I2O75469 434 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 NR3C2P08235 984 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 EIF2AK2P19525 551 aaKnown RBP8.64□□□□□ -1.03
TDP1-209ENST00000554180 EDNRBP24530 442 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 SYKP43405 635 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 NDUFA8P51970 172 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 GRIN1Q05586 938 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 SNW1Q13573 536 aaKnown RBP8.64□□□□□ -1.03
TDP1-209ENST00000554180 IL17AQ16552 155 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 DEFB115Q30KQ5 88 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 PAXIP1Q6ZW49 1069 aaPredicted RBP8.64□□□□□ -1.03
TDP1-209ENST00000554180 VSIG10LQ86VR7 867 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 PLA2G4DQ86XP0 818 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 ELOA2Q8IYF1 753 aaPredicted RBP8.64□□□□□ -1.03
TDP1-209ENST00000554180 FMR1NBQ8N0W7 255 aaPredicted RBP8.64□□□□□ -1.03
TDP1-209ENST00000554180 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
TDP1-209ENST00000554180 GPRASP2Q96D09 838 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 CCDC34Q96HJ3 373 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 CDHR1Q96JP9 859 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 CAPNS2Q96L46 248 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 INPP4AQ96PE3 977 aaPredicted RBP8.64□□□□□ -1.03
TDP1-209ENST00000554180 MMP19Q99542 508 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 RIT2Q99578 217 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 PORCNQ9H237 461 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 CLSTN2Q9H4D0 955 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 TTC12Q9H892 705 aaPredicted RBP8.64□□□□□ -1.03
TDP1-209ENST00000554180 JADE2Q9NQC1 790 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 TMEM63CQ9P1W3 806 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 USP25Q9UHP3 1055 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 KCNH3Q9ULD8 1083 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 PCDHA12Q9UN75 941 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 IVNS1ABPQ9Y6Y0 642 aa8.64□□□□□ -1.03
TDP1-209ENST00000554180 CTAGE5O15320 804 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 MSH4O15457 936 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 PEX10O60683 326 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 ZNF202O95125 648 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 LETM1O95202 739 aaPredicted RBP8.63□□□□□ -1.03
TDP1-209ENST00000554180 ITGB5P18084 799 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 UBA7P41226 1012 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 TXKP42681 527 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
TDP1-209ENST00000554180 UBXN2AP68543 259 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 MRPS9P82933 396 aaKnown RBP8.63□□□□□ -1.03
TDP1-209ENST00000554180 SPIRE1Q08AE8 756 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 MTMR1Q13613 665 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 STXBP2Q15833 593 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 GNPTABQ3T906 1256 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 HAUS3Q68CZ6 603 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 CYP4F22Q6NT55 531 aa8.63□□□□□ -1.03
TDP1-209ENST00000554180 KANK3Q6NY19 840 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms