RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 NEDD4P46934 1319 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 LAMA4Q16363 1823 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 OPLAHO14841 1288 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 CXCL10P02778 98 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 MMP3P08254 477 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 ACTN1P12814 892 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
TUBB3-204ENST00000554116 PTGISQ16647 500 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 TRIM71Q2Q1W2 868 aaKnown RBP13.56□□□□□ -0.24
TUBB3-204ENST00000554116 USH1GQ495M9 461 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 SMC5Q8IY18 1101 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 SYTL5Q8TDW5 730 aaPredicted RBP13.56□□□□□ -0.24
TUBB3-204ENST00000554116 ZKSCAN3Q9BRR0 538 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 FTOQ9C0B1 505 aaKnown RBP eCLIP13.56□□□□□ -0.24
TUBB3-204ENST00000554116 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 MYO7AQ13402 2215 aa13.56□□□□□ -0.24
TUBB3-204ENST00000554116 SIP14410 1827 aa13.55□□□□□ -0.24
TUBB3-204ENST00000554116 HAS3O00219 553 aa13.55□□□□□ -0.24
TUBB3-204ENST00000554116 GPR37L1O60883 481 aa13.55□□□□□ -0.24
TUBB3-204ENST00000554116 BAIAP3O94812 1187 aa13.55□□□□□ -0.24
TUBB3-204ENST00000554116 BFSP2Q13515 415 aa13.55□□□□□ -0.24
TUBB3-204ENST00000554116 RETREG2Q8NC44 543 aa13.55□□□□□ -0.24
TUBB3-204ENST00000554116 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
TUBB3-204ENST00000554116 RGS20O76081 388 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 CKBP12277 381 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 SELPP16109 830 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 CHMP4BP1P59074 171 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 IRX6P78412 446 aaPredicted RBP13.54□□□□□ -0.24
TUBB3-204ENST00000554116 ZNF200P98182 395 aaPredicted RBP13.54□□□□□ -0.24
TUBB3-204ENST00000554116 SEPT14Q6ZU15 432 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 CHD1LQ86WJ1 897 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 ADGRF4Q8IZF3 695 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 CAGE1Q8TC20 777 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 AFAP1L1Q8TED9 768 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 GDPD5Q8WTR4 605 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 ANKS1AQ92625 1134 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 HLA-CQ95604 372 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 OSBPL7Q9BZF2 842 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 SUGCTQ9HAC7 445 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 HDAC6Q9UBN7 1215 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 GTF2IRD1Q9UHL9 959 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 CCDC171Q6TFL3 1326 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
TUBB3-204ENST00000554116 BAZ2BQ9UIF8 2168 aaKnown RBP13.54□□□□□ -0.24
TUBB3-204ENST00000554116 USP34Q70CQ2 3546 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 GH1P01241 217 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 HOXD8P13378 290 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-204ENST00000554116 NUCB1Q02818 461 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 CDC37Q16543 378 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-204ENST00000554116 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 BRDTQ58F21 947 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-204ENST00000554116 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
TUBB3-204ENST00000554116 MFSD6Q6ZSS7 791 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 LRRC8DQ7L1W4 858 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 DGKHQ86XP1 1220 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 EMID1Q96A84 441 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-204ENST00000554116 JMJD4Q9H9V9 463 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 RAD50Q92878 1312 aa13.53□□□□□ -0.24
TUBB3-204ENST00000554116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-204ENST00000554116 LINC01553A4QN01 128 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-204ENST00000554116 GJB5O95377 273 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 F2P00734 622 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 PSEN2P49810 448 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 ERVK-21P61565 698 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 GHRHRQ02643 423 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 QRICH1Q2TAL8 776 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 ZNF618Q5T7W0 954 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 CNKSR3Q6P9H4 555 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 NSUN6Q8TEA1 469 aaKnown RBP13.52□□□□□ -0.25
TUBB3-204ENST00000554116 RMDN3Q96TC7 470 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 MAF1Q9H063 256 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 ABCB11O95342 1321 aa13.52□□□□□ -0.25
TUBB3-204ENST00000554116 ATG2AQ2TAZ0 1938 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 TRIM6-TRIM34B2RNG4 842 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 PCP11498 1178 aaKnown RBP13.51□□□□□ -0.25
TUBB3-204ENST00000554116 EIF2AK2P19525 551 aaKnown RBP13.51□□□□□ -0.25
TUBB3-204ENST00000554116 SP2Q02086 613 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 STXBP2Q15833 593 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.51□□□□□ -0.25
TUBB3-204ENST00000554116 STAG2Q8N3U4 1231 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 ENAHQ8N8S7 591 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-204ENST00000554116 GPKOWQ92917 476 aaPredicted RBP eCLIP13.51□□□□□ -0.25
TUBB3-204ENST00000554116 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 IWS1Q96ST2 819 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 RAD9AQ99638 391 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 PXMP2Q9NR77 195 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 LMCD1Q9NZU5 365 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 NOD1Q9Y239 953 aa13.51□□□□□ -0.25
TUBB3-204ENST00000554116 DOCK5Q9H7D0 1870 aa13.5□□□□□ -0.25
TUBB3-204ENST00000554116 KDM4AO75164 1064 aa13.5□□□□□ -0.25
TUBB3-204ENST00000554116 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
TUBB3-204ENST00000554116 NR3C2P08235 984 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms