RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 LRFN4Q6PJG9 635 aa6.61□□□□□ -1.35
UBR7-203ENST00000553857 CCDC73Q6ZRK6 1079 aa6.61□□□□□ -1.35
UBR7-203ENST00000553857 BICD2Q8TD16 824 aa6.61□□□□□ -1.35
UBR7-203ENST00000553857 CNPY2Q9Y2B0 182 aa6.61□□□□□ -1.35
UBR7-203ENST00000553857 PAXBP1Q9Y5B6 917 aa6.61□□□□□ -1.35
UBR7-203ENST00000553857 SNX11Q9Y5W9 270 aa6.61□□□□□ -1.35
UBR7-203ENST00000553857 CEP170BQ9Y4F5 1589 aaPredicted RBP6.61□□□□□ -1.35
UBR7-203ENST00000553857 RPAP1Q9BWH6 1393 aaPredicted RBP6.6□□□□□ -1.35
UBR7-203ENST00000553857 N4BP2Q86UW6 1770 aaPredicted RBP6.6□□□□□ -1.35
UBR7-203ENST00000553857 PITPNM2Q9BZ72 1349 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 XRN1Q8IZH2 1706 aaKnown RBP6.6□□□□□ -1.35
UBR7-203ENST00000553857 BECN2A8MW95 431 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 SLC27A2O14975 620 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 CCP110O43303 1012 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 GCP02774 474 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 TUBB4AP04350 444 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 SNRPA1P09661 255 aaKnown RBP6.6□□□□□ -1.35
UBR7-203ENST00000553857 ATP5JP18859 108 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 RPS6KB1P23443 525 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 NKG7Q16617 165 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 FLAD1Q8NFF5 587 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 MYRIPQ8NFW9 859 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 RIN3Q8TB24 985 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 TMEM40Q8WWA1 233 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 NEK1Q96PY6 1258 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 GTF2IRD1Q9UHL9 959 aa6.6□□□□□ -1.35
UBR7-203ENST00000553857 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBR7-203ENST00000553857 FAM208AQ9UK61 1670 aaKnown RBP6.6□□□□□ -1.35
UBR7-203ENST00000553857 USP54Q70EL1 1684 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 FANCGO15287 622 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 KINO60870 393 aaKnown RBP6.59□□□□□ -1.35
UBR7-203ENST00000553857 FARP2O94887 1054 aaPredicted RBP6.59□□□□□ -1.35
UBR7-203ENST00000553857 AIMP1Q12904 312 aaKnown RBP6.59□□□□□ -1.35
UBR7-203ENST00000553857 NMIQ13287 307 aaPredicted RBP6.59□□□□□ -1.35
UBR7-203ENST00000553857 MCMDC2Q4G0Z9 681 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 NBPF6Q5VWK0 638 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 PCNX4Q63HM2 1172 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 NAA16Q6N069 864 aaPredicted RBP6.59□□□□□ -1.35
UBR7-203ENST00000553857 CPLX2Q6PUV4 134 aaKnown RBP6.59□□□□□ -1.35
UBR7-203ENST00000553857 UNC5CLQ8IV45 518 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 IFNL2Q8IZJ0 200 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 PLPPR2Q96GM1 343 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 CCDC34Q96HJ3 373 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 NBPF4Q96M43 638 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 TRIM5Q9C035 493 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 HELLSQ9NRZ9 838 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 ANO10Q9NW15 660 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 HOOK1Q9UJC3 728 aaKnown RBP6.59□□□□□ -1.35
UBR7-203ENST00000553857 CTNND2Q9UQB3 1225 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 MTMR6Q9Y217 621 aa6.59□□□□□ -1.35
UBR7-203ENST00000553857 PIK3C2AO00443 1686 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 PRAMEF27A3QJZ7 478 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 ZFYP08048 801 aaPredicted RBP6.58□□□□□ -1.36
UBR7-203ENST00000553857 CEBPAP49715 358 aaPredicted RBP6.58□□□□□ -1.36
UBR7-203ENST00000553857 GSDMDP57764 484 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 SLBPQ14493 270 aaKnown RBP eCLIP6.58□□□□□ -1.36
UBR7-203ENST00000553857 SF3A1Q15459 793 aaKnown RBP6.58□□□□□ -1.36
UBR7-203ENST00000553857 GORABQ5T7V8 394 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 ZSCAN25Q6NSZ9 544 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 GIMAP6Q6P9H5 292 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 ARHGEF25Q86VW2 580 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 USHBP1Q8N6Y0 703 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 GAL3ST3Q96A11 431 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 LIN37Q96GY3 246 aaPredicted RBP6.58□□□□□ -1.36
UBR7-203ENST00000553857 CEP44Q9C0F1 390 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 BOLA2Q9H3K6 86 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 CLSTN2Q9H4D0 955 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 GPR108Q9NPR9 543 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 COPRSQ9NQ92 184 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 SPTLC3Q9NUV7 552 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 PPM1HQ9ULR3 514 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 LMTK3Q96Q04 1460 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 AK9Q5TCS8 1911 aa6.58□□□□□ -1.36
UBR7-203ENST00000553857 ADCY9O60503 1353 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 COL15A1P39059 1388 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 DBX1A6NMT0 343 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 SMTNL1A8MU46 457 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 CDKL5O76039 1030 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 ATF3P18847 181 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 GTF2F1P35269 517 aaKnown RBP eCLIP6.57□□□□□ -1.36
UBR7-203ENST00000553857 ZNF165P49910 485 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 PTH1RQ03431 593 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 GCKRQ14397 625 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 SYCP1Q15431 976 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 STX1AQ16623 288 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 CCDC158Q5M9N0 1113 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 ZNF790Q6PG37 636 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 SPOCD1Q6ZMY3 1216 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 SYNE3Q6ZMZ3 975 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 CYFIP1Q7L576 1253 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 ZSWIM9Q86XI8 627 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 CILP2Q8IUL8 1156 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 CEP57L1Q8IYX8 460 aa6.57□□□□□ -1.36
UBR7-203ENST00000553857 JMYQ8N9B5 988 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms