RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.65
UBR7-203ENST00000553857 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
UBR7-203ENST00000553857 SENP3Q9H4L4 574 aaPredicted RBP21.4■■□□□ 1.02
UBR7-203ENST00000553857 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
UBR7-203ENST00000553857 FOXD1Q16676 465 aa20.06■□□□□ 0.8
UBR7-203ENST00000553857 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
UBR7-203ENST00000553857 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
UBR7-203ENST00000553857 ADRA2BP18089 450 aa18.82■□□□□ 0.6
UBR7-203ENST00000553857 PIAS4Q8N2W9 510 aaPredicted RBP18.71■□□□□ 0.59
UBR7-203ENST00000553857 MSH5O43196 834 aa18.58■□□□□ 0.56
UBR7-203ENST00000553857 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
UBR7-203ENST00000553857 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
UBR7-203ENST00000553857 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
UBR7-203ENST00000553857 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
UBR7-203ENST00000553857 PPP4R3CPQ6ZMV5 832 aa16.89■□□□□ 0.29
UBR7-203ENST00000553857 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
UBR7-203ENST00000553857 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
UBR7-203ENST00000553857 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
UBR7-203ENST00000553857 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
UBR7-203ENST00000553857 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
UBR7-203ENST00000553857 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
UBR7-203ENST00000553857 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
UBR7-203ENST00000553857 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
UBR7-203ENST00000553857 KCNA4P22459 653 aa15.9■□□□□ 0.14
UBR7-203ENST00000553857 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
UBR7-203ENST00000553857 C1QBPQ07021 282 aaKnown RBP15.64■□□□□ 0.09
UBR7-203ENST00000553857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
UBR7-203ENST00000553857 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
UBR7-203ENST00000553857 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
UBR7-203ENST00000553857 SPINK5Q9NQ38 1064 aaPredicted RBP15.19■□□□□ 0.02
UBR7-203ENST00000553857 CAPN15O75808 1086 aa15.06■□□□□ 0
UBR7-203ENST00000553857 DSG3P32926 999 aa15□□□□□ -0.01
UBR7-203ENST00000553857 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
UBR7-203ENST00000553857 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
UBR7-203ENST00000553857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
UBR7-203ENST00000553857 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
UBR7-203ENST00000553857 ABCB7O75027 752 aa14.79□□□□□ -0.04
UBR7-203ENST00000553857 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
UBR7-203ENST00000553857 MYCNP04198 464 aaPredicted RBP14.77□□□□□ -0.05
UBR7-203ENST00000553857 ZNF219Q9P2Y4 722 aaPredicted RBP14.75□□□□□ -0.05
UBR7-203ENST00000553857 APLP2Q06481 763 aa14.74□□□□□ -0.05
UBR7-203ENST00000553857 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
UBR7-203ENST00000553857 ZBTB22O15209 634 aa14.68□□□□□ -0.06
UBR7-203ENST00000553857 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
UBR7-203ENST00000553857 POLA2Q14181 598 aa14.5□□□□□ -0.09
UBR7-203ENST00000553857 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
UBR7-203ENST00000553857 POTEHQ6S545 545 aa14.16□□□□□ -0.14
UBR7-203ENST00000553857 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
UBR7-203ENST00000553857 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
UBR7-203ENST00000553857 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
UBR7-203ENST00000553857 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
UBR7-203ENST00000553857 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
UBR7-203ENST00000553857 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
UBR7-203ENST00000553857 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
UBR7-203ENST00000553857 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
UBR7-203ENST00000553857 REM2Q8IYK8 340 aaPredicted RBP13.85□□□□□ -0.19
UBR7-203ENST00000553857 FBLN2P98095 1184 aa13.8□□□□□ -0.2
UBR7-203ENST00000553857 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
UBR7-203ENST00000553857 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
UBR7-203ENST00000553857 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
UBR7-203ENST00000553857 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
UBR7-203ENST00000553857 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
UBR7-203ENST00000553857 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
UBR7-203ENST00000553857 SSUH2Q9Y2M2 353 aa13.6□□□□□ -0.23
UBR7-203ENST00000553857 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBR7-203ENST00000553857 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
UBR7-203ENST00000553857 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBR7-203ENST00000553857 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
UBR7-203ENST00000553857 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
UBR7-203ENST00000553857 HAX1O00165 279 aa13.32□□□□□ -0.28
UBR7-203ENST00000553857 EVX2Q03828 476 aa13.31□□□□□ -0.28
UBR7-203ENST00000553857 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
UBR7-203ENST00000553857 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
UBR7-203ENST00000553857 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
UBR7-203ENST00000553857 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
UBR7-203ENST00000553857 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
UBR7-203ENST00000553857 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
UBR7-203ENST00000553857 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
UBR7-203ENST00000553857 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
UBR7-203ENST00000553857 PROM2Q8N271 834 aa12.93□□□□□ -0.34
UBR7-203ENST00000553857 GABBR2O75899 941 aa12.91□□□□□ -0.34
UBR7-203ENST00000553857 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
UBR7-203ENST00000553857 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
UBR7-203ENST00000553857 ZRANB1Q9UGI0 708 aa12.75□□□□□ -0.37
UBR7-203ENST00000553857 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
UBR7-203ENST00000553857 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
UBR7-203ENST00000553857 FKBP8Q14318 412 aa12.69□□□□□ -0.38
UBR7-203ENST00000553857 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
UBR7-203ENST00000553857 GALR2O43603 387 aaPredicted RBP12.63□□□□□ -0.39
UBR7-203ENST00000553857 NPM1P06748 294 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBR7-203ENST00000553857 MIER1Q8N108 512 aa12.56□□□□□ -0.4
UBR7-203ENST00000553857 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
UBR7-203ENST00000553857 CLCN6P51797 869 aa12.54□□□□□ -0.4
UBR7-203ENST00000553857 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
UBR7-203ENST00000553857 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
UBR7-203ENST00000553857 LHX8Q68G74 356 aa12.49□□□□□ -0.41
UBR7-203ENST00000553857 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
UBR7-203ENST00000553857 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
UBR7-203ENST00000553857 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
UBR7-203ENST00000553857 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms