RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 HUNKP57058 714 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 ST5P78524 1137 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 PLEKHO1Q53GL0 409 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-223ENST00000553686 C22orf34Q6ZV56 151 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 MFSD4AQ8N468 514 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 DNAJB8Q8NHS0 232 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 ZNF408Q9H9D4 720 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 UBP1Q9NZI7 540 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 KLHL3Q9UH77 587 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 CUL9Q8IWT3 2517 aa8.02□□□□□ -1.12
ATXN3-223ENST00000553686 ROCK2O75116 1388 aaKnown RBP8.02□□□□□ -1.13
ATXN3-223ENST00000553686 RAB3GAP2Q9H2M9 1393 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 ST20-MTHFSA0A0A6YYL1 179 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 FUT4P22083 530 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 CRKP46108 304 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 MTHFSP49914 203 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 FANCCQ00597 558 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 KIF23Q02241 960 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-223ENST00000553686 SEZ6Q53EL9 994 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 INTS3Q68E01 1043 aaKnown RBP8.02□□□□□ -1.13
ATXN3-223ENST00000553686 PRR5LQ6MZQ0 368 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 RGMBQ6NW40 437 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 SLFN12Q8IYM2 578 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 SYNE4Q8N205 404 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 PI4K2BQ8TCG2 481 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 PPP1R13LQ8WUF5 828 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 CYB5D2Q8WUJ1 264 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 COX4I2Q96KJ9 171 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 METTL5Q9NRN9 209 aaKnown RBP8.02□□□□□ -1.13
ATXN3-223ENST00000553686 ADARB2Q9NS39 739 aaKnown RBP8.02□□□□□ -1.13
ATXN3-223ENST00000553686 PCDHB14Q9Y5E9 798 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 CAPN6Q9Y6Q1 641 aa8.02□□□□□ -1.13
ATXN3-223ENST00000553686 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-223ENST00000553686 CYP19A1P11511 503 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-223ENST00000553686 NPR1P16066 1061 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 APOBRQ0VD83 1088 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 IKZF1Q13422 519 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 ZNF792Q3KQV3 632 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 AMOTQ4VCS5 1084 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 ANGEL2Q5VTE6 544 aaKnown RBP8.01□□□□□ -1.13
ATXN3-223ENST00000553686 FBXO46Q6PJ61 603 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-223ENST00000553686 CBLL1Q75N03 491 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
ATXN3-223ENST00000553686 DNAJC10Q8IXB1 793 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 CNBD1Q8NA66 436 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 RGS22Q8NE09 1264 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 RNF34Q969K3 372 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 SPON2Q9BUD6 331 aa8.01□□□□□ -1.13
ATXN3-223ENST00000553686 A0A0C4DFX4 3053 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 COL15A1P39059 1388 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 CARMIL3Q8ND23 1372 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 SLC22A31A6NKX4 558 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 DNAJA2O60884 412 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 VAMP1P23763 118 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 ALDH1B1P30837 517 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 MCM4P33991 863 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 KIR3DL1P43629 444 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 TNNI2P48788 182 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 C1orf141Q5JVX7 400 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 TBC1D9BQ66K14 1250 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 USP48Q86UV5 1035 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 KIAA0825Q8IV33 1275 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 C2orf69Q8N8R5 385 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 BAHD1Q8TBE0 780 aaPredicted RBP8□□□□□ -1.13
ATXN3-223ENST00000553686 NKD1Q969G9 470 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 EAF1Q96JC9 268 aaPredicted RBP8□□□□□ -1.13
ATXN3-223ENST00000553686 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 PSMD1Q99460 953 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 KIF2CQ99661 725 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 NT5C1AQ9BXI3 368 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 GLIS2Q9BZE0 524 aaPredicted RBP8□□□□□ -1.13
ATXN3-223ENST00000553686 SEMA3GQ9NS98 782 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 PGAP2Q9UHJ9 254 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 ST14Q9Y5Y6 855 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 MAP2P11137 1827 aaKnown RBP8□□□□□ -1.13
ATXN3-223ENST00000553686 THSD7BQ9C0I4 1608 aa8□□□□□ -1.13
ATXN3-223ENST00000553686 H3BS24 57 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 ATE1O95260 518 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 CLCQ05315 142 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 ZP2Q05996 745 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 TNK2Q07912 1038 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 ZNF394Q53GI3 561 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 ZNF530Q6P9A1 599 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-223ENST00000553686 PHACTR4Q8IZ21 702 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 UBE2FQ969M7 185 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 MRRFQ96E11 262 aaKnown RBP7.99□□□□□ -1.13
ATXN3-223ENST00000553686 EHMT1Q9H9B1 1298 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 ATP13A1Q9HD20 1204 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 MBNL3Q9NUK0 354 aaKnown RBP7.99□□□□□ -1.13
ATXN3-223ENST00000553686 ZSWIM5Q9P217 1185 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 LTN1O94822 1766 aa7.99□□□□□ -1.13
ATXN3-223ENST00000553686 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 SCAMP3O14828 347 aaKnown RBP7.98□□□□□ -1.13
ATXN3-223ENST00000553686 STARD3NLO95772 234 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 RNASE1P07998 156 aaKnown RBP7.98□□□□□ -1.13
ATXN3-223ENST00000553686 CANXP27824 592 aaKnown RBP7.98□□□□□ -1.13
ATXN3-223ENST00000553686 GBP1P32455 592 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 SLC23A3Q6PIS1 610 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 GK5Q6ZS86 529 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms