RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 RGS3P49796 1198 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PICALMQ13492 652 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 COL9A2Q14055 689 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 RAB30Q15771 203 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 GJC2Q5T442 439 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CCDC84Q86UT8 332 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SIL1Q9H173 461 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SUGT1Q9Y2Z0 365 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 LRRFIP2Q9Y608 721 aaKnown RBP6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TACC3Q9Y6A5 838 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZNF318Q5VUA4 2279 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 EYA2O00167 538 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RFXAPO00287 272 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 DCXO43602 365 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RAD21O60216 631 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CLTBP09497 229 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RAG1P15918 1043 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RABL6Q3YEC7 729 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TMEM240Q5SV17 173 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 KRT40Q6A162 431 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PSAPL1Q6NUJ1 521 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 LPIN2Q92539 896 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SLC28A3Q9HAS3 691 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ALG13Q9NP73 1137 aaKnown RBP6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FAM86C1Q9NVL1 165 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 GNL3LQ9NVN8 582 aaKnown RBP6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RFX7Q2KHR2 1363 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PTPRFP10586 1907 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TRANK1O15050 2925 aa6.89□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MYO15AQ9UKN7 3530 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CHD6Q8TD26 2715 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ATRXP46100 2492 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CACNA1FO60840 1977 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 UTYO14607 1347 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FAM196BA6NMK8 535 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MSCO60682 206 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PEX10O60683 326 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FGFR2P21802 821 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ID4P47928 161 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ATP2B3Q16720 1220 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 DZIP1Q86YF9 867 aaKnown RBP6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TRPV1Q8NER1 839 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SUSD3Q96L08 255 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MFSD14AQ96MC6 490 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 DNAJB12Q9NXW2 375 aaKnown RBP6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FLRT1Q9NZU1 646 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ABCF2Q9UG63 623 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MSRAQ9UJ68 235 aa6.88□□□□□ -1.31
SMARCE1P3-201ENST00000553649 LOC285556D6RIA3 1793 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 NCOR2Q9Y618 2525 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 KIF16BQ96L93 1317 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 DDTLA6NHG4 134 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PDIA4P13667 645 aaKnown RBP6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ADORA1P30542 326 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SOX11P35716 441 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RGS2P41220 211 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ADCYAP1R1P41586 468 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PHKA1P46020 1223 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PLAURQ03405 335 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SEMA3FQ13275 785 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 EML3Q32P44 896 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FAM9BQ8IZU0 186 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FERMT2Q96AC1 680 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 APBA2Q99767 749 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PHACTR1Q9C0D0 580 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 USP44Q9H0E7 712 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TXNRD2Q9NNW7 524 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 NOD1Q9Y239 953 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 DMDP11532 3685 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FRMPD3Q5JV73 1810 aa6.87□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RLFQ13129 1914 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 GAKO14976 1311 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PHIPQ8WWQ0 1821 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 EPOPA6NHQ4 379 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CTNND1O60716 968 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ENTPD3O75355 529 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MYOGP15173 224 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 BTDP43251 543 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RFX5P48382 616 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 HMGCS2P54868 508 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SPP2Q13103 211 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PRR23CQ6ZRP0 262 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ZNF365Q70YC5 407 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ASCL5Q7RTU5 278 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ATG9AQ7Z3C6 839 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FBXO11Q86XK2 927 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ARRDC4Q8NCT1 418 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ANP32EQ9BTT0 268 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ASCC2Q9H1I8 757 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TSPAN10Q9H1Z9 355 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 DDX4Q9NQI0 724 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 DENND2AQ9ULE3 1009 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 DNAH14Q0VDD8 3507 aa6.86□□□□□ -1.31
SMARCE1P3-201ENST00000553649 A0A0G2JMZ2 1700 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CFAP47Q6ZTR5 3102 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 KBTBD13C9JR72 458 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PROB1E7EW31 1015 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms