RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	MICAL3	Q7RTP6	2002 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	KAT6A	Q92794	2004 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ZBTB5	O15062	677 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	CYTH3	O43739	400 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	NR3C2	P08235	984 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	TRDN	Q13061	729 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	STXBP2	Q15833	593 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	BRDT	Q58F21	947 aa	Predicted RBP	13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	RUFY2	Q8WXA3	655 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	KAT2B	Q92831	832 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	CTAGE1	Q96RT6	745 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MYL10	Q9BUA6	226 aa		13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	RBM8A	Q9Y5S9	174 aa	Known RBP	13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984		U3KPZ7	1027 aa	Predicted RBP	13.37	□□□□□ -0.27
TUBA1B-208	ENST00000552984	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ZBBX	A8MT70	800 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984		B4DLN1	442 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	RGS20	O76081	388 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	GH1	P01241	217 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ZNF286B	P0CG31	522 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MYCL	P12524	364 aa	Predicted RBP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MRPL12	P52815	198 aa	Known RBP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	TROAP	Q12815	778 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	WTAP	Q15007	396 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	GDF6	Q6KF10	455 aa	Predicted RBP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	NFRKB	Q6P4R8	1299 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	RALYL	Q86SE5	291 aa	Known RBP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	NCOA7	Q8NI08	942 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PDCD2L	Q9BRP1	358 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	SEZ6L	Q9BYH1	1024 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PRDM6	Q9NQX0	595 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	DDX41	Q9UJV9	622 aa	Known RBP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PCDHA1	Q9Y5I3	950 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	SI	P14410	1827 aa		13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	TCF20	Q9UGU0	1960 aa	Known RBP	13.36	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	SUPT20HL2	P0C7V6	817 aa		13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	GHRHR	Q02643	423 aa		13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	TMEM67	Q5HYA8	995 aa		13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	FCHSD1	Q86WN1	690 aa		13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	IWS1	Q96ST2	819 aa		13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	RIOX1	Q9H6W3	641 aa		13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MRVI1	Q9Y6F6	885 aa		13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	TRANK1	O15050	2925 aa		13.35	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ERICH2	A1L162	156 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	KPNA6	O60684	536 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ADGRE1	Q14246	886 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PGM5	Q15124	567 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	RAB30	Q15771	203 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PTGIS	Q16647	500 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	RAB11FIP4	Q86YS3	637 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PPM1E	Q8WY54	764 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	DHX38	Q92620	1227 aa	Known RBP	13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MAP4K1	Q92918	833 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ALG1	Q9BT22	464 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MTIF3	Q9H2K0	278 aa	Known RBP	13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	NOD1	Q9Y239	953 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	SLC4A7	Q9Y6M7	1214 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	LOXHD1	Q8IVV2	1947 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	TTC28	Q96AY4	2481 aa		13.34	□□□□□ -0.27
TUBA1B-208	ENST00000552984	EIF3J	O75822	258 aa	Known RBP	13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	IQCF3	P0C7M6	154 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	RXRA	P19793	462 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	SP2	Q02086	613 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	RPUSD2	Q8IZ73	545 aa	Known RBP	13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	ZNF654	Q8IZM8	581 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	IGDCC4	Q8TDY8	1250 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	WNT8B	Q93098	351 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	LSG1	Q9H089	658 aa	Known RBP	13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	BCAS3	Q9H6U6	928 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	LY9	Q9HBG7	655 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	HDAC6	Q9UBN7	1215 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	MSRA	Q9UJ68	235 aa		13.33	□□□□□ -0.28
TUBA1B-208	ENST00000552984	NLRC5	Q86WI3	1866 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	PITPNM1	O00562	1244 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	ARHGEF15	O94989	841 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	PLEKHA8P1	O95397	391 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	GGPS1	O95749	300 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	POLR2M	P0CAP2	368 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	ATP2A2	P16615	1042 aa	Known RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	UBA1	P22314	1058 aa	Known RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	PSEN2	P49810	448 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	ZNF200	P98182	395 aa	Predicted RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	PTPN11	Q06124	597 aa	Predicted RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	HIC1	Q14526	733 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	MFSD10	Q14728	455 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	GPNMB	Q14956	572 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	SART3	Q15020	963 aa	Known RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	DGKD	Q16760	1214 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	TCTN1	Q2MV58	587 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	HSDL1	Q3SXM5	330 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	CATIP	Q7Z7H3	387 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	DHX37	Q8IY37	1157 aa	Known RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	CMTR1	Q8N1G2	835 aa	Known RBP	13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	MAF1	Q9H063	256 aa		13.32	□□□□□ -0.28
TUBA1B-208	ENST00000552984	SLC28A3	Q9HAS3	691 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms