RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 SEPT14Q6ZU15 432 aa21.35■■□□□ 1.01
DDX54-209ENST00000551912 FAM184AQ8NB25 1140 aa21.35■■□□□ 1.01
DDX54-209ENST00000551912 DAGLBQ8NCG7 672 aa21.35■■□□□ 1.01
DDX54-209ENST00000551912 SCFD2Q8WU76 684 aa21.35■■□□□ 1.01
DDX54-209ENST00000551912 PGBD1Q96JS3 809 aa21.35■■□□□ 1.01
DDX54-209ENST00000551912 GJB4Q9NTQ9 266 aa21.35■■□□□ 1.01
DDX54-209ENST00000551912 OGDHLQ9ULD0 1010 aa21.35■■□□□ 1.01
DDX54-209ENST00000551912 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.34■■□□□ 1.01
DDX54-209ENST00000551912 RBM47A0AV96 593 aaKnown RBP21.34■■□□□ 1.01
DDX54-209ENST00000551912 DUSP11O75319 330 aaKnown RBP21.34■■□□□ 1.01
DDX54-209ENST00000551912 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
DDX54-209ENST00000551912 MRPS9P82933 396 aaKnown RBP21.34■■□□□ 1.01
DDX54-209ENST00000551912 TRIM29Q14134 588 aa21.34■■□□□ 1.01
DDX54-209ENST00000551912 BLIDQ8IZY5 108 aa21.34■■□□□ 1.01
DDX54-209ENST00000551912 RASGRP4Q8TDF6 673 aa21.34■■□□□ 1.01
DDX54-209ENST00000551912 SNX21Q969T3 373 aa21.34■■□□□ 1.01
DDX54-209ENST00000551912 LENG1Q96BZ8 264 aaPredicted RBP21.34■■□□□ 1.01
DDX54-209ENST00000551912 WDR11Q9BZH6 1224 aa21.34■■□□□ 1.01
DDX54-209ENST00000551912 ADCY6O43306 1168 aa21.33■■□□□ 1.01
DDX54-209ENST00000551912 SMPD1P17405 629 aa21.33■■□□□ 1.01
DDX54-209ENST00000551912 TTLL4Q14679 1199 aa21.33■■□□□ 1.01
DDX54-209ENST00000551912 NPY5RQ15761 445 aa21.33■■□□□ 1.01
DDX54-209ENST00000551912 XPNPEP3Q9NQH7 507 aa21.33■■□□□ 1.01
DDX54-209ENST00000551912 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.33■■□□□ 1.01
DDX54-209ENST00000551912 K7ELQ4 463 aaPredicted RBP21.32■■□□□ 1
DDX54-209ENST00000551912 CAPN15O75808 1086 aa21.32■■□□□ 1
DDX54-209ENST00000551912 SREBF1P36956 1147 aa21.32■■□□□ 1
DDX54-209ENST00000551912 FOSBP53539 338 aa21.32■■□□□ 1
DDX54-209ENST00000551912 CUL4AQ13619 759 aa21.32■■□□□ 1
DDX54-209ENST00000551912 GNPTABQ3T906 1256 aa21.32■■□□□ 1
DDX54-209ENST00000551912 DUSP28Q4G0W2 176 aa21.32■■□□□ 1
DDX54-209ENST00000551912 ZFP91Q96JP5 570 aaPredicted RBP21.32■■□□□ 1
DDX54-209ENST00000551912 RTEL1Q9NZ71 1219 aa21.32■■□□□ 1
DDX54-209ENST00000551912 GNEQ9Y223 722 aaKnown RBP21.32■■□□□ 1
DDX54-209ENST00000551912 KIF3AQ9Y496 699 aa21.32■■□□□ 1
DDX54-209ENST00000551912 M0R2N6 131 aa21.31■■□□□ 1
DDX54-209ENST00000551912 RGS20O76081 388 aa21.31■■□□□ 1
DDX54-209ENST00000551912 TXNP10599 105 aaKnown RBP21.31■■□□□ 1
DDX54-209ENST00000551912 ARHGAP4P98171 946 aa21.31■■□□□ 1
DDX54-209ENST00000551912 KRT40Q6A162 431 aa21.31■■□□□ 1
DDX54-209ENST00000551912 KCNV1Q6PIU1 500 aa21.31■■□□□ 1
DDX54-209ENST00000551912 ANKLE1Q8NAG6 615 aa21.31■■□□□ 1
DDX54-209ENST00000551912 ARRDC4Q8NCT1 418 aa21.31■■□□□ 1
DDX54-209ENST00000551912 C8orf76Q96K31 380 aa21.31■■□□□ 1
DDX54-209ENST00000551912 INPP4AQ96PE3 977 aaPredicted RBP21.31■■□□□ 1
DDX54-209ENST00000551912 BRMS1Q9HCU9 246 aa21.31■■□□□ 1
DDX54-209ENST00000551912 MRVI1Q9Y6F6 885 aa21.31■■□□□ 1
DDX54-209ENST00000551912 FRMPD3Q5JV73 1810 aa21.31■■□□□ 1
DDX54-209ENST00000551912 KIAA1217Q5T5P2 1943 aa21.31■■□□□ 1
DDX54-209ENST00000551912 NKRFO15226 690 aaKnown RBP eCLIP21.3■■□□□ 1
DDX54-209ENST00000551912 ARIH2O95376 493 aa21.3■■□□□ 1
DDX54-209ENST00000551912 PGK1P00558 417 aa21.3■■□□□ 1
DDX54-209ENST00000551912 TMEM63BQ5T3F8 832 aa21.3■■□□□ 1
DDX54-209ENST00000551912 CCDC62Q6P9F0 684 aa21.3■■□□□ 1
DDX54-209ENST00000551912 TLK2Q86UE8 772 aa21.3■■□□□ 1
DDX54-209ENST00000551912 NLRX1Q86UT6 975 aa21.3■■□□□ 1
DDX54-209ENST00000551912 HSCBQ8IWL3 235 aa21.3■■□□□ 1
DDX54-209ENST00000551912 SPC25Q9HBM1 224 aa21.3■■□□□ 1
DDX54-209ENST00000551912 SMC3Q9UQE7 1217 aa21.3■■□□□ 1
DDX54-209ENST00000551912 Q9Y3F1 56 aa21.3■■□□□ 1
DDX54-209ENST00000551912 SYNRGQ9UMZ2 1314 aa21.29■■□□□ 1
DDX54-209ENST00000551912 MMP1P03956 469 aa21.29■■□□□ 1
DDX54-209ENST00000551912 MYCNP04198 464 aaPredicted RBP21.29■■□□□ 1
DDX54-209ENST00000551912 TGFB3P10600 412 aa21.29■■□□□ 1
DDX54-209ENST00000551912 KRT2P35908 639 aa21.29■■□□□ 1
DDX54-209ENST00000551912 GJA9P57773 515 aa21.29■■□□□ 1
DDX54-209ENST00000551912 GJC2Q5T442 439 aaPredicted RBP21.29■■□□□ 1
DDX54-209ENST00000551912 KRT25Q7Z3Z0 450 aa21.29■■□□□ 1
DDX54-209ENST00000551912 RNF180Q86T96 592 aa21.29■■□□□ 1
DDX54-209ENST00000551912 AP5M1Q9H0R1 490 aa21.29■■□□□ 1
DDX54-209ENST00000551912 UPF3AQ9H1J1 476 aaKnown RBP21.29■■□□□ 1
DDX54-209ENST00000551912 DDX41Q9UJV9 622 aaKnown RBP21.29■■□□□ 1
DDX54-209ENST00000551912 UBIAD1Q9Y5Z9 338 aa21.29■■□□□ 1
DDX54-209ENST00000551912 DNM1LO00429 736 aa21.28■■□□□ 1
DDX54-209ENST00000551912 DYNC1LI2O43237 492 aaPredicted RBP21.28■■□□□ 1
DDX54-209ENST00000551912 FIBPO43427 364 aa21.28■■□□□ 1
DDX54-209ENST00000551912 ADAMTS4O75173 837 aa21.28■■□□□ 1
DDX54-209ENST00000551912 CYP3A4P08684 503 aa21.28■■□□□ 1
DDX54-209ENST00000551912 ITGB5P18084 799 aa21.28■■□□□ 1
DDX54-209ENST00000551912 GJB2P29033 226 aa21.28■■□□□ 1
DDX54-209ENST00000551912 ICAM3P32942 547 aa21.28■■□□□ 1
DDX54-209ENST00000551912 ZNF76P36508 570 aa21.28■■□□□ 1
DDX54-209ENST00000551912 GUCY1B3Q02153 619 aa21.28■■□□□ 1
DDX54-209ENST00000551912 LRRC41Q15345 812 aa21.28■■□□□ 1
DDX54-209ENST00000551912 SAFBQ15424 915 aaKnown RBP eCLIP21.28■■□□□ 1
DDX54-209ENST00000551912 LY6KQ17RY6 165 aa21.28■■□□□ 1
DDX54-209ENST00000551912 OXER1Q8TDS5 423 aa21.28■■□□□ 1
DDX54-209ENST00000551912 CRYGNQ8WXF5 182 aa21.28■■□□□ 1
DDX54-209ENST00000551912 GPRASP2Q96D09 838 aa21.28■■□□□ 1
DDX54-209ENST00000551912 CDHR1Q96JP9 859 aa21.28■■□□□ 1
DDX54-209ENST00000551912 CCDC194A0A1B0GVG4 234 aa21.27■■□□□ 1
DDX54-209ENST00000551912 SPATA31C2B4DYI2 1134 aa21.27■■□□□ 1
DDX54-209ENST00000551912 KBTBD13C9JR72 458 aa21.27■■□□□ 1
DDX54-209ENST00000551912 FARP2O94887 1054 aaPredicted RBP21.27■■□□□ 1
DDX54-209ENST00000551912 C6orf222P0C671 652 aaPredicted RBP21.27■■□□□ 1
DDX54-209ENST00000551912 PTGS1P23219 599 aa21.27■■□□□ 1
DDX54-209ENST00000551912 NONOQ15233 471 aaKnown RBP eCLIP21.27■■□□□ 1
DDX54-209ENST00000551912 CEP55Q53EZ4 464 aa21.27■■□□□ 1
DDX54-209ENST00000551912 DIS3L2Q8IYB7 885 aaKnown RBP21.27■■□□□ 1
DDX54-209ENST00000551912 FBXO18Q8NFZ0 1043 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms