RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 PDCD2LQ9BRP1 358 aa26.78■■□□□ 1.88
TROAP-216ENST00000551567 PBX4Q9BYU1 374 aa26.78■■□□□ 1.88
TROAP-216ENST00000551567 MTIF3Q9H2K0 278 aaKnown RBP26.78■■□□□ 1.88
TROAP-216ENST00000551567 MRVI1Q9Y6F6 885 aa26.78■■□□□ 1.88
TROAP-216ENST00000551567 DLL1O00548 723 aa26.77■■□□□ 1.88
TROAP-216ENST00000551567 FOSL2P15408 326 aa26.77■■□□□ 1.88
TROAP-216ENST00000551567 MAFAQ8NHW3 353 aaPredicted RBP26.77■■□□□ 1.88
TROAP-216ENST00000551567 MYL10Q9BUA6 226 aa26.77■■□□□ 1.88
TROAP-216ENST00000551567 LSG1Q9H089 658 aaKnown RBP26.77■■□□□ 1.88
TROAP-216ENST00000551567 DDX41Q9UJV9 622 aaKnown RBP26.77■■□□□ 1.88
TROAP-216ENST00000551567 GRIN2CQ14957 1233 aa26.76■■□□□ 1.87
TROAP-216ENST00000551567 SKAP1Q86WV1 359 aa26.76■■□□□ 1.87
TROAP-216ENST00000551567 IL31RAQ8NI17 732 aa26.76■■□□□ 1.87
TROAP-216ENST00000551567 ESYT1Q9BSJ8 1104 aa26.76■■□□□ 1.87
TROAP-216ENST00000551567 ZNF576Q9H609 170 aa26.76■■□□□ 1.87
TROAP-216ENST00000551567 LY9Q9HBG7 655 aa26.76■■□□□ 1.87
TROAP-216ENST00000551567 MAP3K20Q9NYL2 800 aaKnown RBP26.76■■□□□ 1.87
TROAP-216ENST00000551567 CHD9Q3L8U1 2897 aa26.76■■□□□ 1.87
TROAP-216ENST00000551567 PNMA6FA0A0J9YX94 578 aa26.75■■□□□ 1.87
TROAP-216ENST00000551567 GCOM1H8Y6P7 765 aaPredicted RBP26.75■■□□□ 1.87
TROAP-216ENST00000551567 POLR2MP0CAP2 368 aa26.75■■□□□ 1.87
TROAP-216ENST00000551567 TRAF1Q13077 416 aa26.75■■□□□ 1.87
TROAP-216ENST00000551567 PGM5Q15124 567 aa26.75■■□□□ 1.87
TROAP-216ENST00000551567 CASC1Q6TDU7 716 aa26.75■■□□□ 1.87
TROAP-216ENST00000551567 FCHSD1Q86WN1 690 aa26.75■■□□□ 1.87
TROAP-216ENST00000551567 RPUSD2Q8IZ73 545 aaKnown RBP26.75■■□□□ 1.87
TROAP-216ENST00000551567 ZNF654Q8IZM8 581 aa26.75■■□□□ 1.87
TROAP-216ENST00000551567 NOD1Q9Y239 953 aa26.75■■□□□ 1.87
TROAP-216ENST00000551567 PRC1O43663 620 aa26.74■■□□□ 1.87
TROAP-216ENST00000551567 PTPN11Q06124 597 aaPredicted RBP26.74■■□□□ 1.87
TROAP-216ENST00000551567 DEFB128Q7Z7B8 93 aa26.74■■□□□ 1.87
TROAP-216ENST00000551567 SAMD3Q8N6K7 520 aa26.74■■□□□ 1.87
TROAP-216ENST00000551567 VWCEQ96DN2 955 aa26.74■■□□□ 1.87
TROAP-216ENST00000551567 CUL9Q8IWT3 2517 aa26.73■■□□□ 1.87
TROAP-216ENST00000551567 SORBS3O60504 671 aa26.73■■□□□ 1.87
TROAP-216ENST00000551567 RGS20O76081 388 aa26.73■■□□□ 1.87
TROAP-216ENST00000551567 CASTP20810 708 aaKnown RBP26.73■■□□□ 1.87
TROAP-216ENST00000551567 COL9A3Q14050 684 aaPredicted RBP26.73■■□□□ 1.87
TROAP-216ENST00000551567 DGKDQ16760 1214 aa26.73■■□□□ 1.87
TROAP-216ENST00000551567 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.73■■□□□ 1.87
TROAP-216ENST00000551567 CTCFLQ8NI51 663 aaPredicted RBP26.73■■□□□ 1.87
TROAP-216ENST00000551567 KAT2BQ92831 832 aa26.73■■□□□ 1.87
TROAP-216ENST00000551567 ZFP91Q96JP5 570 aaPredicted RBP26.73■■□□□ 1.87
TROAP-216ENST00000551567 TRIP12Q14669 1992 aaPredicted RBP26.73■■□□□ 1.87
TROAP-216ENST00000551567 ZBBXA8MT70 800 aa26.72■■□□□ 1.87
TROAP-216ENST00000551567 SLC27A2O14975 620 aa26.72■■□□□ 1.87
TROAP-216ENST00000551567 DDAH1O94760 285 aa26.72■■□□□ 1.87
TROAP-216ENST00000551567 VSIG10LQ86VR7 867 aa26.72■■□□□ 1.87
TROAP-216ENST00000551567 DHX37Q8IY37 1157 aaKnown RBP26.72■■□□□ 1.87
TROAP-216ENST00000551567 ANO2Q9NQ90 1003 aa26.72■■□□□ 1.87
TROAP-216ENST00000551567 PRUNE2Q8WUY3 3088 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 ZNF286BP0CG31 522 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 CCND2P30279 289 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 MCM5P33992 734 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 LAMC2Q13753 1193 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 RAB30Q15771 203 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 PTGISQ16647 500 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 NFXL1Q6ZNB6 911 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 EMID1Q96A84 441 aaPredicted RBP26.71■■□□□ 1.87
TROAP-216ENST00000551567 MSRAQ9UJ68 235 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 SLC4A7Q9Y6M7 1214 aa26.71■■□□□ 1.87
TROAP-216ENST00000551567 PITPNM1O00562 1244 aa26.7■■□□□ 1.86
TROAP-216ENST00000551567 SH2B2O14492 632 aaPredicted RBP26.7■■□□□ 1.86
TROAP-216ENST00000551567 KIF5BP33176 963 aa26.7■■□□□ 1.86
TROAP-216ENST00000551567 CREB3L3Q68CJ9 461 aa26.7■■□□□ 1.86
TROAP-216ENST00000551567 GDF6Q6KF10 455 aaPredicted RBP26.7■■□□□ 1.86
TROAP-216ENST00000551567 RETREG2Q8NC44 543 aa26.7■■□□□ 1.86
TROAP-216ENST00000551567 PPTC7Q8NI37 304 aa26.7■■□□□ 1.86
TROAP-216ENST00000551567 MAP3K14Q99558 947 aa26.7■■□□□ 1.86
TROAP-216ENST00000551567 SPZ1Q9BXG8 430 aa26.7■■□□□ 1.86
TROAP-216ENST00000551567 CCDC69A6NI79 296 aa26.69■■□□□ 1.86
TROAP-216ENST00000551567 PFKMP08237 780 aa26.69■■□□□ 1.86
TROAP-216ENST00000551567 BFSP2Q13515 415 aa26.69■■□□□ 1.86
TROAP-216ENST00000551567 GPKOWQ92917 476 aaPredicted RBP eCLIP26.69■■□□□ 1.86
TROAP-216ENST00000551567 RRP36Q96EU6 259 aaKnown RBP26.69■■□□□ 1.86
TROAP-216ENST00000551567 ALG1Q9BT22 464 aa26.69■■□□□ 1.86
TROAP-216ENST00000551567 MTA3Q9BTC8 594 aa26.69■■□□□ 1.86
TROAP-216ENST00000551567 NKX2-4Q9H2Z4 354 aa26.69■■□□□ 1.86
TROAP-216ENST00000551567 DOCK5Q9H7D0 1870 aa26.69■■□□□ 1.86
TROAP-216ENST00000551567 YBX2Q9Y2T7 364 aaKnown RBP26.69■■□□□ 1.86
TROAP-216ENST00000551567 PLEKHA8P1O95397 391 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 GGPS1O95749 300 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 IQCF3P0C7M6 154 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 RXRAP19793 462 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 UBA1P22314 1058 aaKnown RBP26.68■■□□□ 1.86
TROAP-216ENST00000551567 PSEN2P49810 448 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 RABGGTBP53611 331 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 NECTIN1Q15223 517 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 MYSM1Q5VVJ2 828 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 KCNV1Q6PIU1 500 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 CENPQQ7L2Z9 268 aaPredicted RBP26.68■■□□□ 1.86
TROAP-216ENST00000551567 SESTD1Q86VW0 696 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 RAB11FIP4Q86YS3 637 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 TMEM87BQ96K49 555 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 SPATA33Q96N06 139 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 CTAGE1Q96RT6 745 aa26.68■■□□□ 1.86
TROAP-216ENST00000551567 MYO9BQ13459 2157 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 RFC2P35250 354 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 SP2Q02086 613 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 MFSD10Q14728 455 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms