RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 MYBL1P10243 752 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 PRPHP41219 470 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 MAGEA8P43361 318 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 NEDD1Q8NHV4 660 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 MTMR4Q9NYA4 1195 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 BRCA2P51587 3418 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 ECM29Q5VYK3 1845 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 VWA3AA6NCI4 1184 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 EEF2P13639 858 aaKnown RBP23.33■■□□□ 1.33
NPAS3-210ENST00000551492 PTPN21Q16825 1174 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 SPDYE2Q495Y8 402 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 FBXL16Q8N461 479 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 AGBL3Q8NEM8 1001 aa23.33■■□□□ 1.33
NPAS3-210ENST00000551492 ZNF646O15015 1829 aaPredicted RBP23.33■■□□□ 1.32
NPAS3-210ENST00000551492 FSBPO95073 299 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 KIF4BQ2VIQ3 1234 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 EARS2Q5JPH6 523 aaKnown RBP23.32■■□□□ 1.32
NPAS3-210ENST00000551492 AOPEPQ8N6M6 819 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 B4GALNT2Q8NHY0 566 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 ZNF396Q96N95 335 aaPredicted RBP23.32■■□□□ 1.32
NPAS3-210ENST00000551492 TUBB4AP04350 444 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 ACCSLQ4AC99 568 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 BICD2Q8TD16 824 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 RTN3O95197 1032 aaPredicted RBP23.32■■□□□ 1.32
NPAS3-210ENST00000551492 RESTQ13127 1097 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 PKN1Q16512 942 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 SIAH1Q8IUQ4 282 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 ARL10Q8N8L6 244 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 USP28Q96RU2 1077 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 XPO4Q9C0E2 1151 aaKnown RBP23.32■■□□□ 1.32
NPAS3-210ENST00000551492 MAD2L2Q9UI95 211 aa23.32■■□□□ 1.32
NPAS3-210ENST00000551492 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.32■■□□□ 1.32
NPAS3-210ENST00000551492 A0A1W2PRG0 241 aa23.31■■□□□ 1.32
NPAS3-210ENST00000551492 CHMP4BP1P59074 171 aa23.31■■□□□ 1.32
NPAS3-210ENST00000551492 TYW1BQ6NUM6 668 aa23.31■■□□□ 1.32
NPAS3-210ENST00000551492 PROCA1Q8NCQ7 364 aaPredicted RBP23.31■■□□□ 1.32
NPAS3-210ENST00000551492 OR8K1Q8NGG5 319 aa23.31■■□□□ 1.32
NPAS3-210ENST00000551492 WDR19Q8NEZ3 1342 aa23.31■■□□□ 1.32
NPAS3-210ENST00000551492 TIAM2Q8IVF5 1701 aa23.31■■□□□ 1.32
NPAS3-210ENST00000551492 EZRP15311 586 aaKnown RBP23.31■■□□□ 1.32
NPAS3-210ENST00000551492 MAGEA10P43363 369 aaPredicted RBP23.31■■□□□ 1.32
NPAS3-210ENST00000551492 LLPHQ9BRT6 129 aaKnown RBP23.31■■□□□ 1.32
NPAS3-210ENST00000551492 SLC39A2Q9NP94 309 aa23.31■■□□□ 1.32
NPAS3-210ENST00000551492 KLRF2D3W0D1 207 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 CDKL5O76039 1030 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 PAX3P23760 479 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 HDLBPQ00341 1268 aaKnown RBP23.3■■□□□ 1.32
NPAS3-210ENST00000551492 FUT2Q10981 343 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 KIAA1755Q5JYT7 1200 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 DEFB129Q9H1M3 183 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 DDX19AQ9NUU7 478 aaKnown RBP23.3■■□□□ 1.32
NPAS3-210ENST00000551492 GGA3Q9NZ52 723 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 MYO1BO43795 1136 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 CAPN15O75808 1086 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 PDCP20941 246 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 GDAP1L1Q96MZ0 367 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 EPAS1Q99814 870 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 CLIC4Q9Y696 253 aa23.3■■□□□ 1.32
NPAS3-210ENST00000551492 IFNAR1P17181 557 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 TPP2P29144 1249 aaPredicted RBP23.29■■□□□ 1.32
NPAS3-210ENST00000551492 SCNN1BP51168 640 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 ABCB5Q2M3G0 1257 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 CCDC40Q4G0X9 1142 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 SPATA21Q7Z572 469 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 IFNKQ9P0W0 207 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 SMCHD1A6NHR9 2005 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 A0A1B0GVG6 124 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 WNT7AO00755 349 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 ZSCAN9O15535 394 aaPredicted RBP23.29■■□□□ 1.32
NPAS3-210ENST00000551492 MARCKSP29966 332 aaPredicted RBP23.29■■□□□ 1.32
NPAS3-210ENST00000551492 FKBP1AP62942 108 aaKnown RBP23.29■■□□□ 1.32
NPAS3-210ENST00000551492 KRT85P78386 507 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 AKAP17AQ02040 695 aaKnown RBP23.29■■□□□ 1.32
NPAS3-210ENST00000551492 TMTC3Q6ZXV5 915 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 CCDC150Q8NCX0 1101 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 LAMB1P07942 1786 aa23.29■■□□□ 1.32
NPAS3-210ENST00000551492 KIAA0754O94854 1291 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 UPP2O95045 317 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 KIF4AO95239 1232 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 FMNL1O95466 1100 aaPredicted RBP23.28■■□□□ 1.32
NPAS3-210ENST00000551492 POTEIP0CG38 1075 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 POTEJP0CG39 1038 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 TSHZ1Q6ZSZ6 1077 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 PLEKHG4BQ96PX9 1271 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 SLC40A1Q9NP59 571 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 ERLIN1O75477 346 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 RASSF9O75901 435 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 CAVIN2O95810 425 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 TRIM22Q8IYM9 498 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 NAT10Q9H0A0 1025 aaKnown RBP23.28■■□□□ 1.32
NPAS3-210ENST00000551492 ROBO3Q96MS0 1386 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 SHOX2O60902 331 aaPredicted RBP23.28■■□□□ 1.32
NPAS3-210ENST00000551492 ZBED6P86452 979 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 SPECC1Q5M775 1068 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 CAPRIN2Q6IMN6 1127 aaKnown RBP23.28■■□□□ 1.32
NPAS3-210ENST00000551492 MOB2Q70IA6 237 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 HEATR3Q7Z4Q2 680 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 DGKHQ86XP1 1220 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 PIGSQ96S52 555 aa23.28■■□□□ 1.32
NPAS3-210ENST00000551492 MYO3BQ8WXR4 1341 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms