RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 MKI67P46013 3256 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 ADAMTS3O15072 1205 aa18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 CLK2P49760 499 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 FOSBP53539 338 aa18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 MCTP2Q6DN12 878 aa18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 GALNT17Q6IS24 598 aa18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 CRISPLD2Q9H0B8 497 aa18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 GJB4Q9NTQ9 266 aa18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 PCDHA4Q9UN74 947 aa18.57■□□□□ 0.56
CHMP1A-209ENST00000550872 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 RBM47A0AV96 593 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 TRIM29Q14134 588 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 PCNX4Q63HM2 1172 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 XRRA1Q6P2D8 792 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 BLIDQ8IZY5 108 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 FAM184AQ8NB25 1140 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 RASGRP4Q8TDF6 673 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 SCFD2Q8WU76 684 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 LENG1Q96BZ8 264 aaPredicted RBP18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 PHF20Q9BVI0 1012 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 WDR11Q9BZH6 1224 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 RTEL1Q9NZ71 1219 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 OGDHLQ9ULD0 1010 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 BRCA2P51587 3418 aa18.56■□□□□ 0.56
CHMP1A-209ENST00000550872 DUSP11O75319 330 aaKnown RBP18.55■□□□□ 0.56
CHMP1A-209ENST00000550872 MYCNP04198 464 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-209ENST00000550872 SMPD1P17405 629 aa18.55■□□□□ 0.56
CHMP1A-209ENST00000550872 CAPN2P17655 700 aa18.55■□□□□ 0.56
CHMP1A-209ENST00000550872 MRPS9P82933 396 aaKnown RBP18.55■□□□□ 0.56
CHMP1A-209ENST00000550872 TTLL4Q14679 1199 aa18.55■□□□□ 0.56
CHMP1A-209ENST00000550872 DAGLBQ8NCG7 672 aa18.55■□□□□ 0.56
CHMP1A-209ENST00000550872 XPNPEP3Q9NQH7 507 aa18.55■□□□□ 0.56
CHMP1A-209ENST00000550872 ADCY6O43306 1168 aa18.54■□□□□ 0.56
CHMP1A-209ENST00000550872 STAM2O75886 525 aa18.54■□□□□ 0.56
CHMP1A-209ENST00000550872 PGK1P00558 417 aa18.54■□□□□ 0.56
CHMP1A-209ENST00000550872 TXNP10599 105 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-209ENST00000550872 DUSP28Q4G0W2 176 aa18.54■□□□□ 0.56
CHMP1A-209ENST00000550872 TMEM63BQ5T3F8 832 aa18.54■□□□□ 0.56
CHMP1A-209ENST00000550872 ARRDC4Q8NCT1 418 aa18.54■□□□□ 0.56
CHMP1A-209ENST00000550872 LRRC37A2A6NM11 1700 aa18.54■□□□□ 0.56
CHMP1A-209ENST00000550872 RGS20O76081 388 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 SREBF1P36956 1147 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 NPY5RQ15761 445 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 GNPTABQ3T906 1256 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 GJC2Q5T442 439 aaPredicted RBP18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 KRT40Q6A162 431 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 SNX21Q969T3 373 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 C8orf76Q96K31 380 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 AP5M1Q9H0R1 490 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 SPC25Q9HBM1 224 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 BRMS1Q9HCU9 246 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 SMC3Q9UQE7 1217 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 GNEQ9Y223 722 aaKnown RBP18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 KIF3AQ9Y496 699 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 MRVI1Q9Y6F6 885 aa18.53■□□□□ 0.56
CHMP1A-209ENST00000550872 K7ELQ4 463 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 NKRFO15226 690 aaKnown RBP eCLIP18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 DYNC1LI2O43237 492 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 ARIH2O95376 493 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 ZNF76P36508 570 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 ARHGAP4P98171 946 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 CUL4AQ13619 759 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 CCDC62Q6P9F0 684 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 KCNV1Q6PIU1 500 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 NLRX1Q86UT6 975 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 HSCBQ8IWL3 235 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 ANKLE1Q8NAG6 615 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 INPP4AQ96PE3 977 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 Q9Y3F1 56 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 KIAA1217Q5T5P2 1943 aa18.52■□□□□ 0.56
CHMP1A-209ENST00000550872 SYNRGQ9UMZ2 1314 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 M0R2N6 131 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 FARP2O94887 1054 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 MMP1P03956 469 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 C6orf222P0C671 652 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 PTGS1P23219 599 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 GJB2P29033 226 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 KRT2P35908 639 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 GUCY1B3Q02153 619 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 LRRC41Q15345 812 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 LY6KQ17RY6 165 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 KRT25Q7Z3Z0 450 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 RNF180Q86T96 592 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 TLK2Q86UE8 772 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 OXER1Q8TDS5 423 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 COPS5Q92905 334 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 UPF3AQ9H1J1 476 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 DDX41Q9UJV9 622 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 UBIAD1Q9Y5Z9 338 aa18.51■□□□□ 0.55
CHMP1A-209ENST00000550872 CCDC194A0A1B0GVG4 234 aa18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 FIBPO43427 364 aa18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 ADAMTS4O75173 837 aa18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 TGFB3P10600 412 aa18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 ICAM3P32942 547 aa18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 GJA9P57773 515 aa18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 SAFBQ15424 915 aaKnown RBP eCLIP18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 OR6J1Q8NGC5 347 aa18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 GPRASP2Q96D09 838 aa18.5■□□□□ 0.55
CHMP1A-209ENST00000550872 MXRA8Q9BRK3 442 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms