RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 STXBP5LQ9Y2K9 1186 aa13.84□□□□□ -0.19
ERBB3-216ENST00000550869 RIPK3Q9Y572 518 aa13.84□□□□□ -0.19
ERBB3-216ENST00000550869 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
ERBB3-216ENST00000550869 TAL1P17542 331 aaPredicted RBP13.83□□□□□ -0.2
ERBB3-216ENST00000550869 STAT3P40763 770 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 ADCY7P51828 1080 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 MDM2Q00987 491 aaPredicted RBP13.83□□□□□ -0.2
ERBB3-216ENST00000550869 SNX17Q15036 470 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 USH1GQ495M9 461 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 EARS2Q5JPH6 523 aaKnown RBP13.83□□□□□ -0.2
ERBB3-216ENST00000550869 C1orf53Q5VUE5 145 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 FOXD4L5Q5VV16 416 aaPredicted RBP13.83□□□□□ -0.2
ERBB3-216ENST00000550869 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 RIOX2Q8IUF8 465 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 BICD2Q8TD16 824 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 FOXD4L4Q8WXT5 416 aaPredicted RBP13.83□□□□□ -0.2
ERBB3-216ENST00000550869 MAML3Q96JK9 1138 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 BRMS1Q9HCU9 246 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.2
ERBB3-216ENST00000550869 CCPG1Q9ULG6 757 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 ATP6V1DQ9Y5K8 247 aa13.83□□□□□ -0.2
ERBB3-216ENST00000550869 EDIL3O43854 480 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 COBLO75128 1261 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 TOB1P50616 345 aaPredicted RBP13.82□□□□□ -0.2
ERBB3-216ENST00000550869 HSD17B4P51659 736 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 RTP1P59025 263 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 MYSM1Q5VVJ2 828 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 ATL3Q6DD88 541 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 MCTP1Q6DN14 999 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 FAM109BQ6ICB4 259 aaPredicted RBP13.82□□□□□ -0.2
ERBB3-216ENST00000550869 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 CUL5Q93034 780 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 MTMR10Q9NXD2 777 aa13.82□□□□□ -0.2
ERBB3-216ENST00000550869 DIS3Q9Y2L1 958 aaKnown RBP13.82□□□□□ -0.2
ERBB3-216ENST00000550869 BAG4O95429 457 aaKnown RBP13.81□□□□□ -0.2
ERBB3-216ENST00000550869 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
ERBB3-216ENST00000550869 MUM1L1Q5H9M0 696 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
ERBB3-216ENST00000550869 MCTP2Q6DN12 878 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
ERBB3-216ENST00000550869 FAM173BQ6P4H8 233 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
ERBB3-216ENST00000550869 SLC39A5Q6ZMH5 540 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 KRT25Q7Z3Z0 450 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 REXO1Q8N1G1 1221 aaKnown RBP13.81□□□□□ -0.2
ERBB3-216ENST00000550869 CHST13Q8NET6 341 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 MMP19Q99542 508 aa13.81□□□□□ -0.2
ERBB3-216ENST00000550869 NFIBO00712 420 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 FOSP01100 380 aaPredicted RBP13.8□□□□□ -0.2
ERBB3-216ENST00000550869 RARBP10826 455 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 ALAS1P13196 640 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 DNM1Q05193 864 aaKnown RBP13.8□□□□□ -0.2
ERBB3-216ENST00000550869 AP3B2Q13367 1082 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 KCTD2Q14681 263 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 RILPL1Q5EBL4 403 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 USP17L6PQ6QN14 398 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 Q7L0L9 218 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 MCF2L2Q86YR7 1114 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 MSL3Q8N5Y2 521 aaKnown RBP13.8□□□□□ -0.2
ERBB3-216ENST00000550869 RASGRP4Q8TDF6 673 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 CRYGNQ8WXF5 182 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 TRERF1Q96PN7 1200 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 ATP11BQ9Y2G3 1177 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
ERBB3-216ENST00000550869 MORC2Q9Y6X9 1032 aaPredicted RBP13.8□□□□□ -0.2
ERBB3-216ENST00000550869 MYH7BA7E2Y1 1941 aa13.8□□□□□ -0.2
ERBB3-216ENST00000550869 EYSQ5T1H1 3165 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 FAM205CA6NFA0 338 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 GCOM1H8Y6P7 765 aaPredicted RBP13.79□□□□□ -0.2
ERBB3-216ENST00000550869 DLL1O00548 723 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 POLR2MP0CAP2 368 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 LRRC41Q15345 812 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 UBE2SQ16763 222 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 PIK3AP1Q6ZUJ8 805 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 CHAMP1Q96JM3 812 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 TINF2Q9BSI4 451 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 RNF146Q9NTX7 359 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 TMEM260Q9NX78 707 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 RTEL1Q9NZ71 1219 aa13.79□□□□□ -0.2
ERBB3-216ENST00000550869 CDH23Q9H251 3354 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 NASPP49321 788 aaPredicted RBP13.78□□□□□ -0.2
ERBB3-216ENST00000550869 NONOQ15233 471 aaKnown RBP eCLIP13.78□□□□□ -0.2
ERBB3-216ENST00000550869 ZNF792Q3KQV3 632 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 JAKMIP3Q5VZ66 844 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 RNF180Q86T96 592 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 TMEM87AQ8NBN3 555 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 ZNF396Q96N95 335 aaPredicted RBP13.78□□□□□ -0.2
ERBB3-216ENST00000550869 USP28Q96RU2 1077 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 ACAD9Q9H845 621 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 XPNPEP3Q9NQH7 507 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 POLR3EQ9NVU0 708 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 FBXO40Q9UH90 709 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 RCOR1Q9UKL0 485 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
ERBB3-216ENST00000550869 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms