RNA–Protein interactions for RNA: ENST00000550555.1

PAN2-216, Transcript of poly(A) specific ribonuclease subunit PAN2, human

TSL 4

Gene PAN2, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAN2-216	ENST00000550555	KAT2B	Q92831	832 aa		13.84	□□□□□ -0.19
PAN2-216	ENST00000550555	SCLY	Q96I15	445 aa		13.84	□□□□□ -0.19
PAN2-216	ENST00000550555	PDCD2L	Q9BRP1	358 aa		13.84	□□□□□ -0.19
PAN2-216	ENST00000550555	ZNF576	Q9H609	170 aa		13.84	□□□□□ -0.19
PAN2-216	ENST00000550555	MAP3K20	Q9NYL2	800 aa	Known RBP	13.84	□□□□□ -0.19
PAN2-216	ENST00000550555	DDX41	Q9UJV9	622 aa	Known RBP	13.84	□□□□□ -0.19
PAN2-216	ENST00000550555	PCDHA1	Q9Y5I3	950 aa		13.84	□□□□□ -0.19
PAN2-216	ENST00000550555	FRMPD4	Q14CM0	1322 aa		13.84	□□□□□ -0.19
PAN2-216	ENST00000550555	PITPNM1	O00562	1244 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	IFIT3	O14879	490 aa	Known RBP	13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	EIF3J	O75822	258 aa	Known RBP	13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	FGB	P02675	491 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	PFKM	P08237	780 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	FOSL2	P15408	326 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	COL9A3	Q14050	684 aa	Predicted RBP	13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	WTAP	Q15007	396 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	ARHGEF16	Q5VV41	709 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	RALYL	Q86SE5	291 aa	Known RBP	13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	IL31RA	Q8NI17	732 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	PPP1R13L	Q8WUF5	828 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	PIGS	Q96S52	555 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	GPHN	Q9NQX3	736 aa	Predicted RBP	13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	RBM8A	Q9Y5S9	174 aa	Known RBP	13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	PTPRS	Q13332	1948 aa		13.83	□□□□□ -0.2
PAN2-216	ENST00000550555	HOXA13	P31271	388 aa	Predicted RBP	13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	PGM5	Q15124	567 aa		13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	CHST3	Q7LGC8	479 aa		13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	OTOP2	Q7RTS6	562 aa		13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	PPTC7	Q8NI37	304 aa		13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	LSG1	Q9H089	658 aa	Known RBP	13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	MTIF3	Q9H2K0	278 aa	Known RBP	13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	LY9	Q9HBG7	655 aa		13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	YBX2	Q9Y2T7	364 aa	Known RBP	13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	REV3L	O60673	3130 aa		13.82	□□□□□ -0.2
PAN2-216	ENST00000550555	PNMA6F	A0A0J9YX94	578 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	F2	P00734	622 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	RBL2	Q08999	1139 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	SART3	Q15020	963 aa	Known RBP	13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	RAB30	Q15771	203 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	FAM47C	Q5HY64	1035 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	TMEM67	Q5HYA8	995 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	VSIG10L	Q86VR7	867 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	HOMER1	Q86YM7	354 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	RPUSD2	Q8IZ73	545 aa	Known RBP	13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	DHX38	Q92620	1227 aa	Known RBP	13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	MAP3K14	Q99558	947 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	MTA3	Q9BTC8	594 aa		13.81	□□□□□ -0.2
PAN2-216	ENST00000550555	DOCK5	Q9H7D0	1870 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	NCOR1	O75376	2440 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	MUC3A	Q02505	3323 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	ERICH2	A1L162	156 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	HAS3	O00219	553 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	DDAH1	O94760	285 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	IQCF3	P0C7M6	154 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	RFC2	P35250	354 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	DGKD	Q16760	1214 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	GDF6	Q6KF10	455 aa	Predicted RBP	13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	USP38	Q8NB14	1042 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	SPZ1	Q9BXG8	430 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	MRVI1	Q9Y6F6	885 aa		13.8	□□□□□ -0.2
PAN2-216	ENST00000550555	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	SH2B2	O14492	632 aa	Predicted RBP	13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	POLR2M	P0CAP2	368 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	CAST	P20810	708 aa	Known RBP	13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	UBA1	P22314	1058 aa	Known RBP	13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	SP2	Q02086	613 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	TRAF1	Q13077	416 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	LAMC2	Q13753	1193 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	GPNMB	Q14956	572 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	MYSM1	Q5VVJ2	828 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	CATIP	Q7Z7H3	387 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	ZNF654	Q8IZM8	581 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	CAGE1	Q8TC20	777 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	ESYT1	Q9BSJ8	1104 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	MYL10	Q9BUA6	226 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	NKX2-4	Q9H2Z4	354 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	GTF2IRD1	Q9UHL9	959 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	MSRA	Q9UJ68	235 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	SLC4A7	Q9Y6M7	1214 aa		13.79	□□□□□ -0.2
PAN2-216	ENST00000550555	SLC27A2	O14975	620 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	PRC1	O43663	620 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	ZNF286B	P0CG31	522 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	SMARCA1	P28370	1054 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	RABGGTB	P53611	331 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	BFSP2	Q13515	415 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	ADGRE1	Q14246	886 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	PTGIS	Q16647	500 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	CELF3	Q5SZQ8	465 aa	Known RBP	13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	KCNV1	Q6PIU1	500 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	DEFB128	Q7Z7B8	93 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	INPP4A	Q96PE3	977 aa	Predicted RBP	13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	PCDHA11	Q9Y5I1	949 aa		13.78	□□□□□ -0.2
PAN2-216	ENST00000550555	GGPS1	O95749	300 aa		13.77	□□□□□ -0.21
PAN2-216	ENST00000550555	TGFB3	P10600	412 aa		13.77	□□□□□ -0.21
PAN2-216	ENST00000550555	MYCL	P12524	364 aa	Predicted RBP	13.77	□□□□□ -0.21
PAN2-216	ENST00000550555	MYOG	P15173	224 aa		13.77	□□□□□ -0.21
PAN2-216	ENST00000550555	ATP2A2	P16615	1042 aa	Known RBP	13.77	□□□□□ -0.21
PAN2-216	ENST00000550555	CCND2	P30279	289 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms