RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ABHD16BQ9H3Z7 469 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 RBM47A0AV96 593 aaKnown RBP14.9□□□□□ -0.02
RAB5C-206ENST00000550406 ADCY6O43306 1168 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 CYP3A4P08684 503 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 CCND2P30279 289 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 ARHGAP4P98171 946 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 MCTP2Q6DN12 878 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 CYP2W1Q8TAV3 490 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 TBCKQ8TEA7 893 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 ZNF333Q96JL9 665 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 UNC93B1Q9H1C4 597 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 RTEL1Q9NZ71 1219 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 KIF3AQ9Y496 699 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 MYH15Q9Y2K3 1946 aa14.9□□□□□ -0.02
RAB5C-206ENST00000550406 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-206ENST00000550406 WNT7AO00755 349 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 EIF3JO75822 258 aaKnown RBP14.89□□□□□ -0.03
RAB5C-206ENST00000550406 PTGS1P23219 599 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 U2AF2P26368 475 aaKnown RBP eCLIP14.89□□□□□ -0.03
RAB5C-206ENST00000550406 SEMA3FQ13275 785 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 INF2Q27J81 1249 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 PIK3AP1Q6ZUJ8 805 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 KRT25Q7Z3Z0 450 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 FOXP1Q9H334 677 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-206ENST00000550406 VTA1Q9NP79 307 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 NRBP1Q9UHY1 535 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 UBIAD1Q9Y5Z9 338 aa14.89□□□□□ -0.03
RAB5C-206ENST00000550406 POTEFA5A3E0 1075 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 B4DLN1 442 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 ARIH2O95376 493 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 MYCP01106 439 aaPredicted RBP14.88□□□□□ -0.03
RAB5C-206ENST00000550406 ITGB5P18084 799 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 CIITAP33076 1130 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 NONOQ15233 471 aaKnown RBP eCLIP14.88□□□□□ -0.03
RAB5C-206ENST00000550406 SAFBQ15424 915 aaKnown RBP eCLIP14.88□□□□□ -0.03
RAB5C-206ENST00000550406 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 XRRA1Q6P2D8 792 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 SEPT14Q6ZU15 432 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 INPP4AQ96PE3 977 aaPredicted RBP14.88□□□□□ -0.03
RAB5C-206ENST00000550406 EHMT1Q9H9B1 1298 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 ZHX1Q9UKY1 873 aaPredicted RBP14.88□□□□□ -0.03
RAB5C-206ENST00000550406 CNPY2Q9Y2B0 182 aa14.88□□□□□ -0.03
RAB5C-206ENST00000550406 IGLV3-22A0A075B6J6 115 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 CCDC194A0A1B0GVG4 234 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 FAM86B1E9PN63 330 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 H3BQV1 296 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 HSP90AA1P07900 732 aaKnown RBP14.87□□□□□ -0.03
RAB5C-206ENST00000550406 FAM86B2P0C5J1 330 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 CCL5P13501 91 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 PDCP20941 246 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 ADCYAP1R1P41586 468 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 USP11P51784 963 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 LHX8Q68G74 356 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 CCDC62Q6P9F0 684 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 LENG1Q96BZ8 264 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-206ENST00000550406 MPHOSPH6Q99547 160 aaKnown RBP14.87□□□□□ -0.03
RAB5C-206ENST00000550406 MXRA8Q9BRK3 442 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 WDR11Q9BZH6 1224 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 BCAS3Q9H6U6 928 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 BRMS1Q9HCU9 246 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 HMX1Q9NP08 348 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-206ENST00000550406 CENPFP49454 3210 aa14.87□□□□□ -0.03
RAB5C-206ENST00000550406 WDR81Q562E7 1941 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 CYP3A7-CYP3A51PA0A087WV96 503 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 VPS37CA5D8V6 355 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-206ENST00000550406 SPATA31C2B4DYI2 1134 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 MEIS1O00470 390 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 SEPT4O43236 478 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 STX6O43752 255 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 STAM2O75886 525 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 ARP10275 920 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 SMPD1P17405 629 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 CYP3A7P24462 503 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 ICAM3P32942 547 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 TOB1P50616 345 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-206ENST00000550406 SP2Q02086 613 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 PKP1Q13835 747 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 CEP55Q53EZ4 464 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 GJC2Q5T442 439 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-206ENST00000550406 ANO1Q5XXA6 986 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 IQSEC1Q6DN90 963 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 NOSTRINQ8IVI9 506 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 COPS5Q92905 334 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 LENG9Q96B70 501 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 MBOAT7Q96N66 472 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.86□□□□□ -0.03
RAB5C-206ENST00000550406 JADE2Q9NQC1 790 aa14.86□□□□□ -0.03
RAB5C-206ENST00000550406 PAK6Q9NQU5 681 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-206ENST00000550406 DDX41Q9UJV9 622 aaKnown RBP14.86□□□□□ -0.03
RAB5C-206ENST00000550406 ATP9AO75110 1047 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 TDP2O95551 362 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 CNGA1P29973 690 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 DDIT3P35638 169 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
RAB5C-206ENST00000550406 IRX5P78411 483 aaPredicted RBP14.85□□□□□ -0.03
RAB5C-206ENST00000550406 RESTQ13127 1097 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 LY6KQ17RY6 165 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 MCTP1Q6DN14 999 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 FERMT3Q86UX7 667 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms