RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 PCDHB6Q9Y5E3 794 aa8.73□□□□□ -1.01
RNF41-208ENST00000550379 KIAA1217Q5T5P2 1943 aa8.73□□□□□ -1.01
RNF41-208ENST00000550379 SYNGAP1Q96PV0 1343 aa8.73□□□□□ -1.01
RNF41-208ENST00000550379 PLXNA1Q9UIW2 1896 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 POTEB2H3BUK9 544 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 NEMFO60524 1076 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 CUTAO60888 179 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 DTNBO60941 627 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 HOXA13P31271 388 aaPredicted RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 LONP1P36776 959 aaKnown RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 ALDH5A1P51649 535 aaPredicted RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 UBE2HP62256 183 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 MRPS9P82933 396 aaKnown RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 LACTBP83111 547 aaPredicted RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 PTGDRQ13258 359 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 ARHGEF6Q15052 776 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 STXBP2Q15833 593 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 UBE2SQ16763 222 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 SKOR2Q2VWA4 1001 aaPredicted RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 NCAPG2Q86XI2 1143 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 ANKRD35Q8N283 1001 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 GIMAP8Q8ND71 665 aaPredicted RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 RDM1Q8NG50 284 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 RASGRP4Q8TDF6 673 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 SPATA32Q96LK8 384 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 TAAR1Q96RJ0 339 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 MMP19Q99542 508 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 PYM1Q9BRP8 204 aaKnown RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 PAGR1Q9BTK6 254 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 CCSER1Q9C0I3 900 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 EFCC1Q9HA90 598 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 LMBRD1Q9NUN5 540 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 TMEM260Q9NX78 707 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 RNF186Q9NXI6 227 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 FBXO2Q9UK22 296 aaPredicted RBP8.72□□□□□ -1.01
RNF41-208ENST00000550379 IVNS1ABPQ9Y6Y0 642 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 PLXNB2O15031 1838 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 ASTN1O14525 1302 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 NFASCO94856 1347 aa8.72□□□□□ -1.01
RNF41-208ENST00000550379 SOWAHBA6NEL2 793 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 FAM205CA6NFA0 338 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 SPATA31C2B4DYI2 1134 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 FAM86B1E9PN63 330 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 PSMD10O75832 226 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 FAM86B2P0C5J1 330 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 OR52Z1P0C646 297 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 ITGB5P18084 799 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 ADORA2AP29274 412 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 CCND2P30279 289 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 NKX3-2P78367 333 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 SP3Q02447 781 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 SPIRE1Q08AE8 756 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 MAP2K5Q13163 448 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 SEMA3FQ13275 785 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 PPP2R5CQ13362 524 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 PLS1Q14651 629 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 GNPTABQ3T906 1256 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 HYIQ5T013 277 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 FAM173BQ6P4H8 233 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 NSMFQ6X4W1 530 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 SLC30A10Q6XR72 485 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.02
RNF41-208ENST00000550379 HAS1Q92839 578 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 SLC5A5Q92911 643 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 NUDT12Q9BQG2 462 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 RAB34Q9BZG1 259 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 WDR11Q9BZH6 1224 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 TBC1D22BQ9NU19 505 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 WBP1LQ9NX94 342 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 TFIP11Q9UBB9 837 aaKnown RBP8.71□□□□□ -1.02
RNF41-208ENST00000550379 DDX25Q9UHL0 483 aaKnown RBP8.71□□□□□ -1.02
RNF41-208ENST00000550379 USP25Q9UHP3 1055 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 HPSEQ9Y251 543 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 CLIC4Q9Y696 253 aa8.71□□□□□ -1.02
RNF41-208ENST00000550379 WNT7AO00755 349 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 DHX15O43143 795 aaKnown RBP8.7□□□□□ -1.02
RNF41-208ENST00000550379 FIBPO43427 364 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 CCNT1O60563 726 aaKnown RBP8.7□□□□□ -1.02
RNF41-208ENST00000550379 COBLO75128 1261 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 RGS20O76081 388 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 MBD3O95983 291 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 HOXD10P28358 340 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 FCGRTP55899 365 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 MKRN3Q13064 507 aaKnown RBP8.7□□□□□ -1.02
RNF41-208ENST00000550379 STK38Q15208 465 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 LETM2Q2VYF4 491 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 ARHGEF16Q5VV41 709 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 RESP18Q5W5W9 173 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 CCDC62Q6P9F0 684 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 NLRX1Q86UT6 975 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 FCHSD1Q86WN1 690 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 EMID1Q96A84 441 aaPredicted RBP8.7□□□□□ -1.02
RNF41-208ENST00000550379 PGBD1Q96JS3 809 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 TIGD1Q96MW7 591 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 KATNBL1Q9H079 304 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 ABHD16BQ9H3Z7 469 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 VTA1Q9NP79 307 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 KCNH7Q9NS40 1196 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 HOMER2Q9NSB8 354 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 PCDHA7Q9UN72 937 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms