RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SCG2P13521 617 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 RBM25P49756 843 aaKnown RBP12.91□□□□□ -0.34
RAB5B-208ENST00000550283 NAPAP54920 295 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 NKX3-2P78367 333 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 NPY5RQ15761 445 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 DUSP28Q4G0W2 176 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 IQSEC1Q6DN90 963 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 TLK2Q86UE8 772 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 RASGRP4Q8TDF6 673 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 VPS54Q9P1Q0 977 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 PHF24Q9UPV7 400 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 A0A1W2PQ45 241 aaPredicted RBP12.9□□□□□ -0.34
RAB5B-208ENST00000550283 A0A1W2PQY0 241 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 JAK2O60674 1132 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 FDPSP14324 419 aaKnown RBP12.9□□□□□ -0.34
RAB5B-208ENST00000550283 CLK2P49760 499 aaKnown RBP12.9□□□□□ -0.34
RAB5B-208ENST00000550283 ACLYP53396 1101 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 ARHGAP1Q07960 439 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 STXBP2Q15833 593 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 C7orf61Q8IZ16 206 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 RIC8AQ9NPQ8 531 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 PCDHA6Q9UN73 950 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 PCDHA8Q9Y5H6 950 aa12.9□□□□□ -0.34
RAB5B-208ENST00000550283 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 SMCO2A6NFE2 343 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 ASGR1P07306 291 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 TXNP10599 105 aaKnown RBP12.89□□□□□ -0.35
RAB5B-208ENST00000550283 SYN1P17600 705 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 ITGB5P18084 799 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-208ENST00000550283 PSMC6P62333 389 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
RAB5B-208ENST00000550283 GNASQ5JWF2 1037 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 CXCL17Q6UXB2 119 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 SLC39A5Q6ZMH5 540 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 SMARCC2Q8TAQ2 1214 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 CYP2W1Q8TAV3 490 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 DPF3Q92784 378 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 RNF26Q9BY78 433 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-208ENST00000550283 MAF1Q9H063 256 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 MAP3K20Q9NYL2 800 aaKnown RBP12.89□□□□□ -0.35
RAB5B-208ENST00000550283 DDX41Q9UJV9 622 aaKnown RBP12.89□□□□□ -0.35
RAB5B-208ENST00000550283 ZMYND8Q9ULU4 1186 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-208ENST00000550283 KIAA1217Q5T5P2 1943 aa12.89□□□□□ -0.35
RAB5B-208ENST00000550283 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
RAB5B-208ENST00000550283 CCDC196A0A1B0GTZ2 297 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 EIF3JO75822 258 aaKnown RBP12.88□□□□□ -0.35
RAB5B-208ENST00000550283 ADCY7P51828 1080 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 RTP1P59025 263 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 SNX17Q15036 470 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 PPP2R5BQ15173 497 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 FSCN1Q16658 493 aaKnown RBP12.88□□□□□ -0.35
RAB5B-208ENST00000550283 TRIM60Q495X7 471 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 JAKMIP3Q5VZ66 844 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 RNF180Q86T96 592 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 OR6J1Q8NGC5 347 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 GTF3C6Q969F1 213 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 TBC1D32Q96NH3 1257 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-208ENST00000550283 UIMC1Q96RL1 719 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
RAB5B-208ENST00000550283 SLKQ9H2G2 1235 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-208ENST00000550283 ATP9AO75110 1047 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 UBA1P22314 1058 aaKnown RBP12.87□□□□□ -0.35
RAB5B-208ENST00000550283 CCND2P30279 289 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 SSRP1Q08945 709 aaKnown RBP12.87□□□□□ -0.35
RAB5B-208ENST00000550283 TRAF1Q13077 416 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 PCNX4Q63HM2 1172 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 SAMD3Q8N6K7 520 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 SLC17A8Q8NDX2 589 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 NSUN7Q8NE18 718 aaKnown RBP12.87□□□□□ -0.35
RAB5B-208ENST00000550283 CRYGNQ8WXF5 182 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 CUL5Q93034 780 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 ZMYND12Q9H0C1 365 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 KCNJ14Q9UNX9 436 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 CEP290O15078 2479 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
RAB5B-208ENST00000550283 ESYT2A0FGR8 921 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 M0R2N6 131 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 ITGB8P26012 769 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 FOSBP53539 338 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 TLE2Q04725 743 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 TTLL4Q14679 1199 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 HSDL1Q3SXM5 330 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
RAB5B-208ENST00000550283 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 AP5M1Q9H0R1 490 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 PKD2L1Q9P0L9 805 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 ATP11BQ9Y2G3 1177 aa12.86□□□□□ -0.35
RAB5B-208ENST00000550283 UBIAD1Q9Y5Z9 338 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms