RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 DHX38Q92620 1227 aaKnown RBP14.38□□□□□ -0.11
DDX54-206ENST00000549271 FSD1Q9BTV5 496 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 LNPKQ9C0E8 428 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 ZBTB47Q9UFB7 747 aaPredicted RBP14.38□□□□□ -0.11
DDX54-206ENST00000549271 MUTYHQ9UIF7 546 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.38□□□□□ -0.11
DDX54-206ENST00000549271 INSL6Q9Y581 213 aa14.38□□□□□ -0.11
DDX54-206ENST00000549271 NKRFO15226 690 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX54-206ENST00000549271 FOXP2O15409 715 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 ALDH5A1P51649 535 aaPredicted RBP14.37□□□□□ -0.11
DDX54-206ENST00000549271 TCF15Q12870 199 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 TCEAL5Q5H9L2 206 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 B4GALNT3Q6L9W6 998 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 NSMFQ6X4W1 530 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 SESTD1Q86VW0 696 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 TICAM2Q86XR7 235 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
DDX54-206ENST00000549271 EDAQ92838 391 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 PRRX2Q99811 253 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 ADD3Q9UEY8 706 aaKnown RBP14.37□□□□□ -0.11
DDX54-206ENST00000549271 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 DCHS1Q96JQ0 3298 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 RALGAPA2Q2PPJ7 1873 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 MYO15AQ9UKN7 3530 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 RAD50Q92878 1312 aa14.37□□□□□ -0.11
DDX54-206ENST00000549271 COL4A6Q14031 1691 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 GFRA3O60609 400 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 LTBRP36941 435 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 SLC1A4P43007 532 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 HTRA4P83105 476 aaPredicted RBP14.36□□□□□ -0.11
DDX54-206ENST00000549271 NUCB1Q02818 461 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 MKRN4PQ13434 485 aaPredicted RBP14.36□□□□□ -0.11
DDX54-206ENST00000549271 IKBKEQ14164 716 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 SMAD2Q15796 467 aaKnown RBP14.36□□□□□ -0.11
DDX54-206ENST00000549271 EPC2Q52LR7 807 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 RCSD1Q6JBY9 416 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 GDF6Q6KF10 455 aaPredicted RBP14.36□□□□□ -0.11
DDX54-206ENST00000549271 FAM117BQ6P1L5 589 aa14.36□□□□□ -0.11
DDX54-206ENST00000549271 ALG13Q9NP73 1137 aaKnown RBP14.36□□□□□ -0.11
DDX54-206ENST00000549271 PLXNA3P51805 1871 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 H3BNC9 293 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 FGRP09769 529 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 CKBP12277 381 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 MCCP23508 829 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 SNAP25P60880 206 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 BAATQ14032 418 aaPredicted RBP14.35□□□□□ -0.11
DDX54-206ENST00000549271 PPP2R5BQ15173 497 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 ALX1Q15699 326 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 PKN1Q16512 942 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 CHD1LQ86WJ1 897 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 PLEKHM2Q8IWE5 1019 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 COPS5Q92905 334 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 SAMD11Q96NU1 681 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 POP1Q99575 1024 aaKnown RBP14.35□□□□□ -0.11
DDX54-206ENST00000549271 NSUN3Q9H649 340 aaKnown RBP14.35□□□□□ -0.11
DDX54-206ENST00000549271 IL17RBQ9NRM6 502 aa14.35□□□□□ -0.11
DDX54-206ENST00000549271 PTPRZ1P23471 2315 aaPredicted RBP14.34□□□□□ -0.11
DDX54-206ENST00000549271 TSPY2A6NKD2 308 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 RBAK-RBAKDNI3L0D1 243 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 ORC4O43929 436 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
DDX54-206ENST00000549271 IKQ13123 557 aaPredicted RBP14.34□□□□□ -0.11
DDX54-206ENST00000549271 CTC1Q2NKJ3 1217 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 TRAF7Q6Q0C0 670 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX54-206ENST00000549271 SCFD2Q8WU76 684 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 CLDND1Q9NY35 253 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 CCPG1Q9ULG6 757 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 PRR12Q9ULL5 1215 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 STX8Q9UNK0 236 aa14.34□□□□□ -0.11
DDX54-206ENST00000549271 TMEM221A6NGB7 291 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 M0R296 226 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 MBTPS2O43462 519 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 ICAM1P05362 532 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 EDNRBP24530 442 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 GPM6BQ13491 265 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 MBTPS1Q14703 1052 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 TRIM67Q6ZTA4 783 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 EP400NLQ6ZTU2 488 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 RPAINQ86UA6 219 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 KAT2BQ92831 832 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 OSBPL3Q9H4L5 887 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.12
DDX54-206ENST00000549271 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
DDX54-206ENST00000549271 VPS13AQ96RL7 3174 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 NFIBO00712 420 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 NCK2O43639 380 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 CHMP4BP1P59074 171 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 CTDSPL2Q05D32 466 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 DLX2Q07687 328 aaPredicted RBP14.32□□□□□ -0.12
DDX54-206ENST00000549271 TRIM71Q2Q1W2 868 aaKnown RBP14.32□□□□□ -0.12
DDX54-206ENST00000549271 BTNL9Q6UXG8 535 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 KCTD1Q719H9 257 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 DCAF4Q8WV16 495 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 PBXIP1Q96AQ6 731 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 GTF2IRD1Q9UHL9 959 aa14.32□□□□□ -0.12
DDX54-206ENST00000549271 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 NMT2O60551 498 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms