RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 CA3P07451 260 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 PARP1P09874 1014 aaKnown RBP15□□□□□ -0.01
PTCH1-218ENST00000548945 CASTP20810 708 aaKnown RBP15□□□□□ -0.01
PTCH1-218ENST00000548945 GHRHRQ02643 423 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 RBL2Q08999 1139 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 PTGISQ16647 500 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 QRICH1Q2TAL8 776 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 FBXO11Q86XK2 927 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 AFG1LQ8WV93 481 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 TBC1D5Q92609 795 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 TAAR1Q96RJ0 339 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 MAP3K20Q9NYL2 800 aaKnown RBP15□□□□□ -0.01
PTCH1-218ENST00000548945 COL20A1Q9P218 1284 aa15□□□□□ -0.01
PTCH1-218ENST00000548945 TCF20Q9UGU0 1960 aaKnown RBP15□□□□□ -0.01
PTCH1-218ENST00000548945 BAZ2BQ9UIF8 2168 aaKnown RBP15□□□□□ -0.01
PTCH1-218ENST00000548945 KIF28PB7ZC32 967 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 DGKDQ16760 1214 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 LY6KQ17RY6 165 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 B4GALNT3Q6L9W6 998 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 SEPT14Q6ZU15 432 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 HERC6Q8IVU3 1022 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 SAMD3Q8N6K7 520 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 IL27Q8NEV9 243 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 ADAMTS19Q8TE59 1207 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 KAT2BQ92831 832 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 CTAGE1Q96RT6 745 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 UBAC1Q9BSL1 405 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 FTOQ9C0B1 505 aaKnown RBP eCLIP14.99□□□□□ -0.01
PTCH1-218ENST00000548945 JMJD4Q9H9V9 463 aa14.99□□□□□ -0.01
PTCH1-218ENST00000548945 DDX41Q9UJV9 622 aaKnown RBP14.99□□□□□ -0.01
PTCH1-218ENST00000548945 GTPBP6O43824 516 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-218ENST00000548945 NR3C2P08235 984 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 HSD17B4P51659 736 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 AAK1Q2M2I8 961 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 ARHGEF16Q5VV41 709 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 GDF6Q6KF10 455 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-218ENST00000548945 PPTC7Q8NI37 304 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 KATNAL1Q9BW62 490 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 AMNQ9BXJ7 453 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 PXMP2Q9NR77 195 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 MTCH2Q9Y6C9 303 aa14.98□□□□□ -0.01
PTCH1-218ENST00000548945 DHX16O60231 1041 aaKnown RBP14.97□□□□□ -0.01
PTCH1-218ENST00000548945 HOXD8P13378 290 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-218ENST00000548945 SELPP16109 830 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 KCNJ6P48051 423 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 TAP1Q03518 808 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 TRAF1Q13077 416 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 LAMC2Q13753 1193 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 IFIT1BQ5T764 474 aaKnown RBP14.97□□□□□ -0.01
PTCH1-218ENST00000548945 KCNV1Q6PIU1 500 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 PPP1R13LQ8WUF5 828 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 MTMR8Q96EF0 704 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 UHRF1Q96T88 793 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-218ENST00000548945 GTF2IRD1Q9UHL9 959 aa14.97□□□□□ -0.01
PTCH1-218ENST00000548945 OPLAHO14841 1288 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 F2P00734 622 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 CFBP00751 764 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 IGHDP01880 384 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 CXCL10P02778 98 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 EIF2AK2P19525 551 aaKnown RBP14.96□□□□□ -0.01
PTCH1-218ENST00000548945 CHMP4BP1P59074 171 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 SEC23AQ15436 765 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 STOX1Q6ZVD7 989 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 LRRC8DQ7L1W4 858 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 CHST3Q7LGC8 479 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 C7orf31Q8N865 590 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 DHX38Q92620 1227 aaKnown RBP14.96□□□□□ -0.01
PTCH1-218ENST00000548945 VAT1LQ9HCJ6 419 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 MRVI1Q9Y6F6 885 aa14.96□□□□□ -0.01
PTCH1-218ENST00000548945 KLRF2D3W0D1 207 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 HAS3O00219 553 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 ZBTB5O15062 677 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 TLL1O43897 1013 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 EFCAB14O75071 495 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 PPFIA4O75335 1185 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 CKBP12277 381 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 PSEN2P49810 448 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 WDR5P61964 334 aaKnown RBP14.95□□□□□ -0.02
PTCH1-218ENST00000548945 PTK7Q13308 1070 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 GPNMBQ14956 572 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 CNKSR3Q6P9H4 555 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 DHX37Q8IY37 1157 aaKnown RBP14.95□□□□□ -0.02
PTCH1-218ENST00000548945 MICALL1Q8N3F8 863 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 HDAC6Q9UBN7 1215 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 COG5Q9UP83 839 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 PCDHA1Q9Y5I3 950 aa14.95□□□□□ -0.02
PTCH1-218ENST00000548945 COL4A4P53420 1690 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-218ENST00000548945 MICAL3Q7RTP6 2002 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 ABHD14A-ACY1A0A1B0GW23 586 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 PALM3A6NDB9 673 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-218ENST00000548945 TGFB3P10600 412 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 BMP1P13497 986 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 MFSD10Q14728 455 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 KIAA0753Q2KHM9 967 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 VSIG10LQ86VR7 867 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 STAG2Q8N3U4 1231 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 ARNTL2Q8WYA1 636 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 PDCD2LQ9BRP1 358 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 MAD2L2Q9UI95 211 aa14.94□□□□□ -0.02
PTCH1-218ENST00000548945 SIP14410 1827 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms