RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 MRGPRX3Q96LB0 322 aa6.79□□□□□ -1.32
CNOT2-216ENST00000548939 LGR4Q9BXB1 951 aa6.79□□□□□ -1.32
CNOT2-216ENST00000548939 SMPD4Q9NXE4 827 aa6.79□□□□□ -1.32
CNOT2-216ENST00000548939 INPP5FQ9Y2H2 1132 aa6.79□□□□□ -1.32
CNOT2-216ENST00000548939 NISCHQ9Y2I1 1504 aa6.79□□□□□ -1.32
CNOT2-216ENST00000548939 SLC6A11P48066 632 aa6.78□□□□□ -1.32
CNOT2-216ENST00000548939 RPL11P62913 178 aaKnown RBP6.78□□□□□ -1.32
CNOT2-216ENST00000548939 KIAA2012Q0VF49 1180 aa6.78□□□□□ -1.32
CNOT2-216ENST00000548939 MILR1Q7Z6M3 343 aa6.78□□□□□ -1.32
CNOT2-216ENST00000548939 STK32CQ86UX6 486 aa6.78□□□□□ -1.32
CNOT2-216ENST00000548939 NPLOC4Q8TAT6 608 aa6.78□□□□□ -1.32
CNOT2-216ENST00000548939 MRRFQ96E11 262 aaKnown RBP6.78□□□□□ -1.32
CNOT2-216ENST00000548939 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.32
CNOT2-216ENST00000548939 TMPRSS5Q9H3S3 457 aa6.78□□□□□ -1.32
CNOT2-216ENST00000548939 TIMM13Q9Y5L4 95 aaPredicted RBP6.78□□□□□ -1.32
CNOT2-216ENST00000548939 FPR2P25090 351 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 ADAM17P78536 824 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 FAM26FQ5R3K3 315 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 MROH9Q5TGP6 573 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 CEP68Q76N32 757 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 FAM124AQ86V42 546 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 RIOX2Q8IUF8 465 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 FAM126BQ8IXS8 530 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 TGIF2Q9GZN2 237 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
CNOT2-216ENST00000548939 ABCC9O60706 1549 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 PLATP00750 562 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 ITGA1P56199 1179 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 CYP4F3Q08477 520 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 E4F1Q66K89 784 aaPredicted RBP6.76□□□□□ -1.33
CNOT2-216ENST00000548939 MCTP2Q6DN12 878 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 LGI4Q8N135 537 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 BTN2A2Q8WVV5 523 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 DIO2Q92813 273 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 TRMT2BQ96GJ1 504 aaKnown RBP6.76□□□□□ -1.33
CNOT2-216ENST00000548939 YIPF4Q9BSR8 244 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 CCSER2Q9H7U1 834 aa6.76□□□□□ -1.33
CNOT2-216ENST00000548939 NGRNQ9NPE2 291 aaKnown RBP6.76□□□□□ -1.33
CNOT2-216ENST00000548939 MROH6A6NGR9 719 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 MYO1BO43795 1136 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 SNRPB2P08579 225 aaKnown RBP6.75□□□□□ -1.33
CNOT2-216ENST00000548939 HOXC12P31275 282 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 BCL6P41182 706 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 ECI1P42126 302 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 STAT5AP42229 794 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 GTF2A2P52657 109 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 TBC1D10BQ4KMP7 808 aaPredicted RBP6.75□□□□□ -1.33
CNOT2-216ENST00000548939 BORAQ6PGQ7 559 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 LOXL4Q96JB6 756 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 LRP2BPQ9P2M1 347 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 INVSQ9Y283 1065 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 X6R8D5 127 aa6.75□□□□□ -1.33
CNOT2-216ENST00000548939 DDX3XO00571 662 aaKnown RBP eCLIP6.74□□□□□ -1.33
CNOT2-216ENST00000548939 MEFVO15553 781 aaPredicted RBP6.74□□□□□ -1.33
CNOT2-216ENST00000548939 TBX1O43435 398 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 NKX3-2P78367 333 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 KCNAB2Q13303 367 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 SV2CQ496J9 727 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 C6orf15Q6UXA7 325 aaPredicted RBP6.74□□□□□ -1.33
CNOT2-216ENST00000548939 NLRP10Q86W26 655 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 CCDC103Q8IW40 242 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 Q8N1Y9 231 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 TXNDC5Q8NBS9 432 aaKnown RBP6.74□□□□□ -1.33
CNOT2-216ENST00000548939 TMEM169Q96HH4 297 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 SAMD11Q96NU1 681 aa6.74□□□□□ -1.33
CNOT2-216ENST00000548939 TMEFF2Q9UIK5 374 aaPredicted RBP6.74□□□□□ -1.33
CNOT2-216ENST00000548939 COA3Q9Y2R0 106 aaPredicted RBP6.74□□□□□ -1.33
CNOT2-216ENST00000548939 SMAD7O15105 426 aaKnown RBP6.73□□□□□ -1.33
CNOT2-216ENST00000548939 ITGAVP06756 1048 aa6.73□□□□□ -1.33
CNOT2-216ENST00000548939 PRR31Q5SQ13 230 aa6.73□□□□□ -1.33
CNOT2-216ENST00000548939 ZNF227Q86WZ6 799 aa6.73□□□□□ -1.33
CNOT2-216ENST00000548939 FAM178BQ8IXR5 827 aa6.73□□□□□ -1.33
CNOT2-216ENST00000548939 TTC9BQ8N6N2 239 aa6.73□□□□□ -1.33
CNOT2-216ENST00000548939 C8orf49Q96NF6 230 aa6.73□□□□□ -1.33
CNOT2-216ENST00000548939 ZNF536O15090 1300 aa6.73□□□□□ -1.33
CNOT2-216ENST00000548939 ARNTLO00327 626 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 SCG5P05408 212 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
CNOT2-216ENST00000548939 KCNJ6P48051 423 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 CHRNA2Q15822 529 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 CR1LQ2VPA4 569 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 PRAMEF18Q5VWM3 479 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
CNOT2-216ENST00000548939 CPZQ66K79 652 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 LCORQ96JN0 433 aaPredicted RBP6.72□□□□□ -1.33
CNOT2-216ENST00000548939 ACTR10Q9NZ32 417 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
CNOT2-216ENST00000548939 ZNF652Q9Y2D9 606 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 MRVI1Q9Y6F6 885 aa6.72□□□□□ -1.33
CNOT2-216ENST00000548939 CPP00450 1065 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 ADAM9Q13443 819 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 TNNI3KQ59H18 835 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 ACBD5Q5T8D3 534 aaPredicted RBP6.71□□□□□ -1.34
CNOT2-216ENST00000548939 GLB1LQ6UWU2 654 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 PPIL6Q8IXY8 311 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 KREMEN2Q8NCW0 462 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 RCBTB1Q8NDN9 531 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 CHST13Q8NET6 341 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 CHAMP1Q96JM3 812 aa6.71□□□□□ -1.34
CNOT2-216ENST00000548939 CCDC140Q96MF4 163 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms