RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 ZFPM1Q8IX07 1006 aa4.2□□□□□ -1.74
DEPDC4-204ENST00000547823 TXNDC5Q8NBS9 432 aaKnown RBP4.2□□□□□ -1.74
DEPDC4-204ENST00000547823 WRNIP1Q96S55 665 aa4.2□□□□□ -1.74
DEPDC4-204ENST00000547823 ZNF747Q9BV97 191 aa4.2□□□□□ -1.74
DEPDC4-204ENST00000547823 DIP2BQ9P265 1576 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 MAGI1Q96QZ7 1491 aaPredicted RBP4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 NPHP3-ACAD11A0A0J9YXS1 232 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 GUCY2CP25092 1073 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 SLC6A11P48066 632 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 EPHB4P54760 987 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 CDSNQ15517 529 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 MCTP2Q6DN12 878 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 DNAJC14Q6Y2X3 702 aaPredicted RBP4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 LIMS2Q7Z4I7 341 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 RBBP8NLQ8NC74 664 aaPredicted RBP4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 DNERQ8NFT8 737 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 SEC14L1Q92503 715 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 FERD3LQ96RJ6 166 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 DEF6Q9H4E7 631 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 BCAS3Q9H6U6 928 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 ZNF214Q9UL59 606 aaPredicted RBP4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 ZNF451Q9Y4E5 1061 aa4.19□□□□□ -1.74
DEPDC4-204ENST00000547823 POLA1P09884 1462 aaPredicted RBP4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 WDR97A6NE52 1622 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 FAM86C2PA6NEL3 165 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 MUSKO15146 869 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 CYP1A1P04798 512 aaPredicted RBP4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 AMPD2Q01433 879 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 PRR31Q5SQ13 230 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 SPON2Q9BUD6 331 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 RXFP1Q9HBX9 757 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 CD248Q9HCU0 757 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 PPP4R1LQ9P1A2 415 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 GULP1Q9UBP9 304 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 TESMINQ9Y4I5 508 aa4.18□□□□□ -1.74
DEPDC4-204ENST00000547823 TDRD9Q8NDG6 1382 aaKnown RBP4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 C2orf71A6NGG8 1288 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 STXBP3O00186 592 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 B4GALT3O60512 393 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 PPM1BO75688 479 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 TP53P04637 393 aaPredicted RBP4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 ZNF28P17035 718 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 ITGA1P56199 1179 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 PPP2R5DQ14738 602 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 HS1BP3Q53T59 392 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 PRAMEF18Q5VWM3 479 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 SLFN13Q68D06 897 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 HEATR6Q6AI08 1181 aaKnown RBP4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 PKN3Q6P5Z2 889 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 CD300LDQ6UXZ3 194 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 UNC5AQ6ZN44 842 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 ARHGEF18Q6ZSZ5 1173 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 FAM126BQ8IXS8 530 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 CRACR2BQ8N4Y2 399 aaPredicted RBP4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 HAUS7Q99871 368 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 TMEM168Q9H0V1 697 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 PHAXQ9H814 394 aaKnown RBP4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 L2HGDHQ9H9P8 463 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 RAD54L2Q9Y4B4 1467 aa4.17□□□□□ -1.74
DEPDC4-204ENST00000547823 MAPKBP1O60336 1514 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 CEP170Q5SW79 1584 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 DDX3XO00571 662 aaKnown RBP eCLIP4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 CBFA2T2O43439 604 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 NTRK1P04629 796 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 TGFB2P61812 414 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 PPP2CBP62714 309 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 PPP2CAP67775 309 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 NKX3-2P78367 333 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 ICAM4Q14773 271 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 RCC1LQ96I51 464 aaKnown RBP4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 YIPF4Q9BSR8 244 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 FBLN5Q9UBX5 448 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 GRIN2BQ13224 1484 aa4.16□□□□□ -1.74
DEPDC4-204ENST00000547823 SHROOM2Q13796 1616 aa4.15□□□□□ -1.74
DEPDC4-204ENST00000547823 PATE3B3GLJ2 98 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 FUCA1P04066 466 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 CHRNA2Q15822 529 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 MROH9Q5TGP6 573 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 RIOX2Q8IUF8 465 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 YTHDC1Q96MU7 727 aaKnown RBP4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 CLIC6Q96NY7 704 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 MMP19Q99542 508 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 KLHL25Q9H0H3 589 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 JADE2Q9NQC1 790 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 CGGBP1Q9UFW8 167 aaPredicted RBP4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 PBRM1Q86U86 1689 aa4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 WDR33Q9C0J8 1336 aaKnown RBP4.15□□□□□ -1.75
DEPDC4-204ENST00000547823 SOGA1O94964 1423 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 C7orf72A4D263 438 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 GPR42O15529 346 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 AMHP03971 560 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 NAT2P11245 290 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 COL9A2Q14055 689 aaPredicted RBP4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 POMZP3Q6PJE2 187 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 CPNE8Q86YQ8 564 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 KLHL36Q8N4N3 616 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 ARHGEF39Q8N4T4 335 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 C19orf47Q8N9M1 422 aaKnown RBP4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 PLEKHO2Q8TD55 490 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 IGDCC4Q8TDY8 1250 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms