RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 BRWD1Q9NSI6 2320 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 ZNF213O14771 459 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 F2P00734 622 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 CXCL10P02778 98 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 IGFBP4P22692 258 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 MRPS5P82675 430 aaKnown RBP14.69□□□□□ -0.06
COPS7A-221ENST00000546229 AAMPQ13685 434 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 KRT40Q6A162 431 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 CWC27Q6UX04 472 aaKnown RBP14.69□□□□□ -0.06
COPS7A-221ENST00000546229 STAG2Q8N3U4 1231 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 AFAP1L1Q8TED9 768 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 PXMP2Q9NR77 195 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 GTF2IRD1Q9UHL9 959 aa14.69□□□□□ -0.06
COPS7A-221ENST00000546229 DDX41Q9UJV9 622 aaKnown RBP14.69□□□□□ -0.06
COPS7A-221ENST00000546229 COL4A6Q14031 1691 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 MICAL3Q7RTP6 2002 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 TCF20Q9UGU0 1960 aaKnown RBP14.68□□□□□ -0.06
COPS7A-221ENST00000546229 LCHNA4D1U4 455 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 NBNO60934 754 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 BAIAP3O94812 1187 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 GH1P01241 217 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 BMP1P13497 986 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 HOXC8P31273 242 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 MFAP1P55081 439 aaKnown RBP14.68□□□□□ -0.06
COPS7A-221ENST00000546229 WDR5P61964 334 aaKnown RBP14.68□□□□□ -0.06
COPS7A-221ENST00000546229 TFF2Q03403 129 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 MBTPS1Q14703 1052 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 TMEM67Q5HYA8 995 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 CAGE1Q8TC20 777 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 NSUN6Q8TEA1 469 aaKnown RBP14.68□□□□□ -0.06
COPS7A-221ENST00000546229 IWS1Q96ST2 819 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 GPHNQ9NQX3 736 aaPredicted RBP14.68□□□□□ -0.06
COPS7A-221ENST00000546229 MYH7BA7E2Y1 1941 aa14.68□□□□□ -0.06
COPS7A-221ENST00000546229 GSPT1P15170 499 aaKnown RBP14.67□□□□□ -0.06
COPS7A-221ENST00000546229 DEFB103AP81534 67 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 BFSP2Q13515 415 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 PTGISQ16647 500 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 BRDTQ58F21 947 aaPredicted RBP14.67□□□□□ -0.06
COPS7A-221ENST00000546229 CCDC178Q5BJE1 867 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 B4GALNT3Q6L9W6 998 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 SEPT14Q6ZU15 432 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 CYB5R4Q7L1T6 521 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 IQCA1Q86XH1 822 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 IL31RAQ8NI17 732 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 PPTC7Q8NI37 304 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 NECAB3Q96P71 396 aaPredicted RBP14.67□□□□□ -0.06
COPS7A-221ENST00000546229 UHRF1Q96T88 793 aaPredicted RBP14.67□□□□□ -0.06
COPS7A-221ENST00000546229 RMDN3Q96TC7 470 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 MPHOSPH6Q99547 160 aaKnown RBP14.67□□□□□ -0.06
COPS7A-221ENST00000546229 KAT14Q9H8E8 782 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
COPS7A-221ENST00000546229 MAD2L2Q9UI95 211 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 TAF6LQ9Y6J9 622 aa14.67□□□□□ -0.06
COPS7A-221ENST00000546229 FRMPD4Q14CM0 1322 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 ZNF286BP0CG31 522 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 CKBP12277 381 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 ACTN1P12814 892 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 SELPP16109 830 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 EIF2AK2P19525 551 aaKnown RBP14.66□□□□□ -0.06
COPS7A-221ENST00000546229 PDE4AP27815 886 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 KCNQ1P51787 676 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 STXBP2Q15833 593 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 STOX1Q6ZVD7 989 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 LRRC8DQ7L1W4 858 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 TMCO2Q7Z6W1 182 aaPredicted RBP14.66□□□□□ -0.06
COPS7A-221ENST00000546229 FBXO11Q86XK2 927 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 PDCD2LQ9BRP1 358 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 CERS4Q9HA82 394 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 HDAC6Q9UBN7 1215 aa14.66□□□□□ -0.06
COPS7A-221ENST00000546229 MRPL11Q9Y3B7 192 aaKnown RBP14.66□□□□□ -0.06
COPS7A-221ENST00000546229 DOCK5Q9H7D0 1870 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 ATG2AQ2TAZ0 1938 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 PALM3A6NDB9 673 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-221ENST00000546229 B4DLN1 442 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 NR3C2P08235 984 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 PARP1P09874 1014 aaKnown RBP14.65□□□□□ -0.06
COPS7A-221ENST00000546229 PSEN2P49810 448 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 MRPL12P52815 198 aaKnown RBP14.65□□□□□ -0.06
COPS7A-221ENST00000546229 GRB10Q13322 594 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 MCF2L2Q86YR7 1114 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 SENP2Q9HC62 589 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 DIAPH3Q9NSV4 1193 aa14.65□□□□□ -0.06
COPS7A-221ENST00000546229 CYTH3O43739 400 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 EIF3JO75822 258 aaKnown RBP14.64□□□□□ -0.07
COPS7A-221ENST00000546229 SP2Q02086 613 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 MFSD10Q14728 455 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 DGKDQ16760 1214 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
COPS7A-221ENST00000546229 HSDL1Q3SXM5 330 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 MYSM1Q5VVJ2 828 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 CNKSR3Q6P9H4 555 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 RETREG2Q8NC44 543 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 EXOC6Q8TAG9 804 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 GPKOWQ92917 476 aaPredicted RBP eCLIP14.64□□□□□ -0.07
COPS7A-221ENST00000546229 C16orf70Q9BSU1 422 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 RWDD1Q9H446 243 aaPredicted RBP14.64□□□□□ -0.07
COPS7A-221ENST00000546229 RAPGEFL1Q9UHV5 662 aa14.64□□□□□ -0.07
COPS7A-221ENST00000546229 BAZ2BQ9UIF8 2168 aaKnown RBP14.63□□□□□ -0.07
COPS7A-221ENST00000546229 HIP1O00291 1037 aa14.63□□□□□ -0.07
COPS7A-221ENST00000546229 ZBTB5O15062 677 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms