RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 CTCFLQ8NI51 663 aaPredicted RBP26.34■■□□□ 1.81
CHD4-214ENST00000545942 SLC27A2O14975 620 aa26.33■■□□□ 1.81
CHD4-214ENST00000545942 MYCLP12524 364 aaPredicted RBP26.33■■□□□ 1.81
CHD4-214ENST00000545942 KIF5BP33176 963 aa26.33■■□□□ 1.81
CHD4-214ENST00000545942 BMP2KLQ5H9B9 411 aa26.33■■□□□ 1.81
CHD4-214ENST00000545942 RPUSD2Q8IZ73 545 aaKnown RBP26.33■■□□□ 1.81
CHD4-214ENST00000545942 EMID1Q96A84 441 aaPredicted RBP26.33■■□□□ 1.81
CHD4-214ENST00000545942 ANO2Q9NQ90 1003 aa26.33■■□□□ 1.81
CHD4-214ENST00000545942 SCN10AQ9Y5Y9 1956 aa26.32■■□□□ 1.8
CHD4-214ENST00000545942 CASTP20810 708 aaKnown RBP26.32■■□□□ 1.8
CHD4-214ENST00000545942 PGM5Q15124 567 aa26.32■■□□□ 1.8
CHD4-214ENST00000545942 TMTC2Q8N394 836 aa26.32■■□□□ 1.8
CHD4-214ENST00000545942 PPP1R13LQ8WUF5 828 aa26.32■■□□□ 1.8
CHD4-214ENST00000545942 TIFAQ96CG3 184 aa26.32■■□□□ 1.8
CHD4-214ENST00000545942 SCLYQ96I15 445 aa26.32■■□□□ 1.8
CHD4-214ENST00000545942 TMEM87BQ96K49 555 aa26.32■■□□□ 1.8
CHD4-214ENST00000545942 MYL10Q9BUA6 226 aa26.32■■□□□ 1.8
CHD4-214ENST00000545942 CHMP4BP1P59074 171 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 LAMC2Q13753 1193 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 DGKDQ16760 1214 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 CREB3L3Q68CJ9 461 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 KCNV1Q6PIU1 500 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 OTOP2Q7RTS6 562 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 VSIG10LQ86VR7 867 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 FCHSD1Q86WN1 690 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 PIBF1Q8WXW3 757 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 SPZ1Q9BXG8 430 aa26.31■■□□□ 1.8
CHD4-214ENST00000545942 CXXC1Q9P0U4 656 aaPredicted RBP26.31■■□□□ 1.8
CHD4-214ENST00000545942 CDH23Q9H251 3354 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 SH2B2O14492 632 aaPredicted RBP26.3■■□□□ 1.8
CHD4-214ENST00000545942 RGS20O76081 388 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 PFKMP08237 780 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 NECTIN1Q15223 517 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 NFXL1Q6ZNB6 911 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 DHX37Q8IY37 1157 aaKnown RBP26.3■■□□□ 1.8
CHD4-214ENST00000545942 PPTC7Q8NI37 304 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 MYLIPQ8WY64 445 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 PBX4Q9BYU1 374 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 NOD1Q9Y239 953 aa26.3■■□□□ 1.8
CHD4-214ENST00000545942 CCDC69A6NI79 296 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 GRXCR1A8MXD5 290 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 PITPNM1O00562 1244 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 SMARCA1P28370 1054 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 CCND2P30279 289 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 IL31RAQ8NI17 732 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 KAT2BQ92831 832 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 RRP36Q96EU6 259 aaKnown RBP26.29■■□□□ 1.8
CHD4-214ENST00000545942 LZTS2Q9BRK4 669 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 ZNF576Q9H609 170 aa26.29■■□□□ 1.8
CHD4-214ENST00000545942 LIFRP42702 1097 aa26.28■■□□□ 1.8
CHD4-214ENST00000545942 GNAQP50148 359 aa26.28■■□□□ 1.8
CHD4-214ENST00000545942 SESTD1Q86VW0 696 aa26.28■■□□□ 1.8
CHD4-214ENST00000545942 SKAP1Q86WV1 359 aa26.28■■□□□ 1.8
CHD4-214ENST00000545942 KIAA1217Q5T5P2 1943 aa26.27■■□□□ 1.8
CHD4-214ENST00000545942 TGFB3P10600 412 aa26.27■■□□□ 1.8
CHD4-214ENST00000545942 PBX2P40425 430 aa26.27■■□□□ 1.8
CHD4-214ENST00000545942 BFSP2Q13515 415 aa26.27■■□□□ 1.8
CHD4-214ENST00000545942 PTGISQ16647 500 aa26.27■■□□□ 1.8
CHD4-214ENST00000545942 RETREG2Q8NC44 543 aa26.27■■□□□ 1.8
CHD4-214ENST00000545942 VWCEQ96DN2 955 aa26.27■■□□□ 1.8
CHD4-214ENST00000545942 KATNAL1Q9BW62 490 aa26.27■■□□□ 1.8
CHD4-214ENST00000545942 SEC63Q9UGP8 760 aaKnown RBP26.27■■□□□ 1.8
CHD4-214ENST00000545942 CALM1P0DP23 149 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 CALM2P0DP24 149 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 CALM3P0DP25 149 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 FOSL2P15408 326 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 COL9A3Q14050 684 aaPredicted RBP26.26■■□□□ 1.79
CHD4-214ENST00000545942 GRIN2CQ14957 1233 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 RAB30Q15771 203 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 CELF3Q5SZQ8 465 aaKnown RBP26.26■■□□□ 1.79
CHD4-214ENST00000545942 RNF20Q5VTR2 975 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 MYSM1Q5VVJ2 828 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 MAFAQ8NHW3 353 aaPredicted RBP26.26■■□□□ 1.79
CHD4-214ENST00000545942 MSRAQ9UJ68 235 aa26.26■■□□□ 1.79
CHD4-214ENST00000545942 RFC2P35250 354 aa26.25■■□□□ 1.79
CHD4-214ENST00000545942 DEFB128Q7Z7B8 93 aa26.25■■□□□ 1.79
CHD4-214ENST00000545942 SLC12A7Q9Y666 1083 aa26.25■■□□□ 1.79
CHD4-214ENST00000545942 SLC4A7Q9Y6M7 1214 aa26.25■■□□□ 1.79
CHD4-214ENST00000545942 FRMPD4Q14CM0 1322 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 BAZ2BQ9UIF8 2168 aaKnown RBP26.24■■□□□ 1.79
CHD4-214ENST00000545942 PLEKHA8P1O95397 391 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 GGPS1O95749 300 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 F2P00734 622 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 IQCF3P0C7M6 154 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 HOXD8P13378 290 aaPredicted RBP26.24■■□□□ 1.79
CHD4-214ENST00000545942 UBA1P22314 1058 aaKnown RBP26.24■■□□□ 1.79
CHD4-214ENST00000545942 GDF6Q6KF10 455 aaPredicted RBP26.24■■□□□ 1.79
CHD4-214ENST00000545942 SRBD1Q8N5C6 995 aaKnown RBP26.24■■□□□ 1.79
CHD4-214ENST00000545942 CCDC155Q8N6L0 562 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 C7orf31Q8N865 590 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 ZFP91Q96JP5 570 aaPredicted RBP26.24■■□□□ 1.79
CHD4-214ENST00000545942 SPATA33Q96N06 139 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 GTF2IRD1Q9UHL9 959 aa26.24■■□□□ 1.79
CHD4-214ENST00000545942 ZBBXA8MT70 800 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 DLL1O00548 723 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 PPFIA4O75335 1185 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 STAM2O75886 525 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 ZNF286BP0CG31 522 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 RXRAP19793 462 aa26.23■■□□□ 1.79
CHD4-214ENST00000545942 PSEN2P49810 448 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms