RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 MAML3Q96JK9 1138 aa13.61□□□□□ -0.23
LTBR-214ENST00000545445 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
LTBR-214ENST00000545445 UHRF1Q96T88 793 aaPredicted RBP13.61□□□□□ -0.23
LTBR-214ENST00000545445 GAS2L1Q99501 681 aaPredicted RBP13.61□□□□□ -0.23
LTBR-214ENST00000545445 PRDM12Q9H4Q4 367 aa13.61□□□□□ -0.23
LTBR-214ENST00000545445 ACAD9Q9H845 621 aa13.61□□□□□ -0.23
LTBR-214ENST00000545445 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
LTBR-214ENST00000545445 RNF146Q9NTX7 359 aa13.61□□□□□ -0.23
LTBR-214ENST00000545445 MAP3K20Q9NYL2 800 aaKnown RBP13.61□□□□□ -0.23
LTBR-214ENST00000545445 hCG_1642624A0A1W2PR95 340 aa13.6□□□□□ -0.23
LTBR-214ENST00000545445 GRXCR1A8MXD5 290 aa13.6□□□□□ -0.23
LTBR-214ENST00000545445 JAK2O60674 1132 aa13.6□□□□□ -0.23
LTBR-214ENST00000545445 PPP1R11O60927 126 aaPredicted RBP13.6□□□□□ -0.23
LTBR-214ENST00000545445 RARBP10826 455 aa13.6□□□□□ -0.23
LTBR-214ENST00000545445 FDPSP14324 419 aaKnown RBP13.6□□□□□ -0.23
LTBR-214ENST00000545445 CCDC85BQ15834 202 aaPredicted RBP13.6□□□□□ -0.23
LTBR-214ENST00000545445 USH1GQ495M9 461 aa13.6□□□□□ -0.23
LTBR-214ENST00000545445 GALNT17Q6IS24 598 aa13.6□□□□□ -0.23
LTBR-214ENST00000545445 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.6□□□□□ -0.233e-8■■■■■ 29.7
LTBR-214ENST00000545445 RIPK3Q9Y572 518 aa13.6□□□□□ -0.23
LTBR-214ENST00000545445 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 STXBP3O00186 592 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 FCER1AP12319 257 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 PDIA4P13667 645 aaKnown RBP13.59□□□□□ -0.23
LTBR-214ENST00000545445 GNA11P29992 359 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 MRPL12P52815 198 aaKnown RBP13.59□□□□□ -0.23
LTBR-214ENST00000545445 NAPAP54920 295 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 FAAP100Q0VG06 881 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 TRIM29Q14134 588 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 ADGRE1Q14246 886 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 WWC2Q6AWC2 1192 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 RNF180Q86T96 592 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 DDX11Q96FC9 970 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 NECAB3Q96P71 396 aaPredicted RBP13.59□□□□□ -0.23
LTBR-214ENST00000545445 ALG1Q9BT22 464 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 PBX4Q9BYU1 374 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 SLC5A4Q9NY91 659 aa13.59□□□□□ -0.23
LTBR-214ENST00000545445 RBM19Q9Y4C8 960 aaKnown RBP13.59□□□□□ -0.23
LTBR-214ENST00000545445 PPFIA3O75145 1194 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 TAL1P17542 331 aaPredicted RBP13.58□□□□□ -0.24
LTBR-214ENST00000545445 PDCP20941 246 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 CALML3P27482 149 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 GJB2P29033 226 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 MRPS5P82675 430 aaKnown RBP13.58□□□□□ -0.24
LTBR-214ENST00000545445 GHRHRQ02643 423 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 KCTD2Q14681 263 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 MCTP2Q6DN12 878 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 BICD2Q8TD16 824 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 CLEC4DQ8WXI8 215 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
LTBR-214ENST00000545445 CUL5Q93034 780 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 ZMYND12Q9H0C1 365 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 HOMER2Q9NSB8 354 aa13.58□□□□□ -0.24
LTBR-214ENST00000545445 BAZ2BQ9UIF8 2168 aaKnown RBP13.58□□□□□ -0.24
LTBR-214ENST00000545445 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
LTBR-214ENST00000545445 SMCO2A6NFE2 343 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 GCOM1H8Y6P7 765 aaPredicted RBP13.57□□□□□ -0.24
LTBR-214ENST00000545445 PIK3CDO00329 1044 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 PGK2P07205 417 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 POLR2MP0CAP2 368 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 IGFBP4P22692 258 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 NLRP5P59047 1200 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 MUM1L1Q5H9M0 696 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 ANKRD33Q7Z3H0 272 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 ANKRD35Q8N283 1001 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 C8orf76Q96K31 380 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 MMP19Q99542 508 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 PSTPIP2Q9H939 334 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 STARD7Q9NQZ5 370 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 DAXXQ9UER7 740 aaPredicted RBP13.57□□□□□ -0.24
LTBR-214ENST00000545445 TBX21Q9UL17 535 aa13.57□□□□□ -0.24
LTBR-214ENST00000545445 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 NFIBO00712 420 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 ADAMTS4O75173 837 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 TIMP1P01033 207 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
LTBR-214ENST00000545445 HSD17B4P51659 736 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 ADCY7P51828 1080 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 TMEM240Q5SV17 173 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 RNF207Q6ZRF8 634 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 C16orf59Q7L2K0 433 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 A1CFQ9NQ94 594 aaKnown RBP13.56□□□□□ -0.24
LTBR-214ENST00000545445 CYP39A1Q9NYL5 469 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 NRBP1Q9UHY1 535 aa13.56□□□□□ -0.24
LTBR-214ENST00000545445 XIRP2A4UGR9 3374 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 LOC102724159A0A0B4J2E5 919 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 OPLAHO14841 1288 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 CFBP00751 764 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 FOSP01100 380 aaPredicted RBP13.55□□□□□ -0.24
LTBR-214ENST00000545445 ZNF865P0CJ78 1059 aaPredicted RBP13.55□□□□□ -0.24
LTBR-214ENST00000545445 ACRP10323 421 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 ACLYP53396 1101 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 RPS6P62753 249 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms