RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 MYOGP15173 224 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 GHRHRQ02643 423 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 PTH1RQ03431 593 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 CHST3Q7LGC8 479 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 KAT2BQ92831 832 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 CTAGE1Q96RT6 745 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 SLC28A3Q9HAS3 691 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 PRDM6Q9NQX0 595 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 PALM3A6NDB9 673 aaPredicted RBP22.84■■□□□ 1.25
CACNA1C-230ENST00000543114 ZBTB5O15062 677 aa22.84■■□□□ 1.25
CACNA1C-230ENST00000543114 IQCF3P0C7M6 154 aa22.84■■□□□ 1.25
CACNA1C-230ENST00000543114 ATP2A2P16615 1042 aaKnown RBP22.84■■□□□ 1.25
CACNA1C-230ENST00000543114 SENP2Q9HC62 589 aa22.84■■□□□ 1.25
CACNA1C-230ENST00000543114 DDX41Q9UJV9 622 aaKnown RBP22.84■■□□□ 1.25
CACNA1C-230ENST00000543114 NOD1Q9Y239 953 aa22.84■■□□□ 1.25
CACNA1C-230ENST00000543114 NR3C2P08235 984 aa22.83■■□□□ 1.25
CACNA1C-230ENST00000543114 CHMLP26374 656 aa22.83■■□□□ 1.25
CACNA1C-230ENST00000543114 TRDNQ13061 729 aa22.83■■□□□ 1.25
CACNA1C-230ENST00000543114 PPP2R2DQ66LE6 453 aa22.83■■□□□ 1.25
CACNA1C-230ENST00000543114 HOMER1Q86YM7 354 aa22.83■■□□□ 1.25
CACNA1C-230ENST00000543114 PPM1EQ8WY54 764 aa22.83■■□□□ 1.25
CACNA1C-230ENST00000543114 PCDHA11Q9Y5I1 949 aa22.83■■□□□ 1.25
CACNA1C-230ENST00000543114 MRVI1Q9Y6F6 885 aa22.83■■□□□ 1.25
CACNA1C-230ENST00000543114 EIF3JO75822 258 aaKnown RBP22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 HOXA13P31271 388 aaPredicted RBP22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 RFC2P35250 354 aa22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 GRM4Q14833 912 aa22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 PTGISQ16647 500 aa22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 GDF6Q6KF10 455 aaPredicted RBP22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 SESTD1Q86VW0 696 aa22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 RETREG2Q8NC44 543 aa22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 PDCD2LQ9BRP1 358 aa22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 PCDHA1Q9Y5I3 950 aa22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 U3KPZ7 1027 aaPredicted RBP22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 TRANK1O15050 2925 aa22.82■■□□□ 1.24
CACNA1C-230ENST00000543114 RGS20O76081 388 aa22.81■■□□□ 1.24
CACNA1C-230ENST00000543114 IRX6P78412 446 aaPredicted RBP22.81■■□□□ 1.24
CACNA1C-230ENST00000543114 BFSP2Q13515 415 aa22.81■■□□□ 1.24
CACNA1C-230ENST00000543114 STOX1Q6ZVD7 989 aa22.81■■□□□ 1.24
CACNA1C-230ENST00000543114 IL31RAQ8NI17 732 aa22.81■■□□□ 1.24
CACNA1C-230ENST00000543114 RUFY2Q8WXA3 655 aa22.81■■□□□ 1.24
CACNA1C-230ENST00000543114 EMID1Q96A84 441 aaPredicted RBP22.81■■□□□ 1.24
CACNA1C-230ENST00000543114 IFIT3O14879 490 aaKnown RBP22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 CYTH3O43739 400 aa22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 ZNF286BP0CG31 522 aa22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 ACTN1P12814 892 aa22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 CASTP20810 708 aaKnown RBP22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 IGFBP4P22692 258 aa22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 DGKDQ16760 1214 aa22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 PPTC7Q8NI37 304 aa22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 DHX38Q92620 1227 aaKnown RBP22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 PIGSQ96S52 555 aa22.8■■□□□ 1.24
CACNA1C-230ENST00000543114 E7EWF7 191 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 SGSM2O43147 1006 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 F2P00734 622 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 MYCLP12524 364 aaPredicted RBP22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 PGM5Q15124 567 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 RALYLQ86SE5 291 aaKnown RBP22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 CAGE1Q8TC20 777 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 SLC9A7Q96T83 725 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 RIOX1Q9H6W3 641 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 GTF2IRD1Q9UHL9 959 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 XIRP2A4UGR9 3374 aa22.79■■□□□ 1.24
CACNA1C-230ENST00000543114 SORBS3O60504 671 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 CA3P07451 260 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 PSEN2P49810 448 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 ANTXR2P58335 489 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 TROAPQ12815 778 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 WTAPQ15007 396 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 TJAP1Q5JTD0 557 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 CCDC155Q8N6L0 562 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 NCOA7Q8NI08 942 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 AFAP1L1Q8TED9 768 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 FTOQ9C0B1 505 aaKnown RBP eCLIP22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 MAP3K20Q9NYL2 800 aaKnown RBP22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 HDAC6Q9UBN7 1215 aa22.78■■□□□ 1.24
CACNA1C-230ENST00000543114 DOCK5Q9H7D0 1870 aa22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 ERICH2A1L162 156 aa22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 RBAK-RBAKDNI3L0D1 243 aa22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 RBL2Q08999 1139 aa22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 LAMC2Q13753 1193 aa22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 GPNMBQ14956 572 aa22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 CCDC85BQ15834 202 aaPredicted RBP22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 TMEM67Q5HYA8 995 aa22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 DHX37Q8IY37 1157 aaKnown RBP22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 SYMPKQ92797 1274 aaKnown RBP22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 ZFP91Q96JP5 570 aaPredicted RBP22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 ALG1Q9BT22 464 aa22.77■■□□□ 1.24
CACNA1C-230ENST00000543114 HAS3O00219 553 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 HOXD8P13378 290 aaPredicted RBP22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 UBA1P22314 1058 aaKnown RBP22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 MFSD10Q14728 455 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 SART3Q15020 963 aaKnown RBP22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 LRRC8DQ7L1W4 858 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 VSIG10LQ86VR7 867 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 FCHSD1Q86WN1 690 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 MB21D2Q8IYB1 491 aaPredicted RBP22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 SAMD3Q8N6K7 520 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 C7orf31Q8N865 590 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 GPKOWQ92917 476 aaPredicted RBP eCLIP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms