RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 NKRFO15226 690 aaKnown RBP eCLIP18.44■□□□□ 0.54
KDM2B-216ENST00000543025 ZNF185O15231 689 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 CHRNA5P30532 468 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 CCDC96Q2M329 555 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 COG1Q8WTW3 980 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 HPS3Q969F9 1004 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 TRERF1Q96PN7 1200 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 HPCAL4Q9UM19 191 aa18.44■□□□□ 0.54
KDM2B-216ENST00000543025 ESYT2A0FGR8 921 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 RNF40O75150 1001 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 RPS6KA5O75582 802 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 TXKP42681 527 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 UNC13DQ70J99 1090 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 MASTLQ96GX5 879 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 IFIH1Q9BYX4 1025 aaKnown RBP18.43■□□□□ 0.54
KDM2B-216ENST00000543025 NDST4Q9H3R1 872 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 FAM204AQ9H8W3 233 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 BIN2Q9UBW5 565 aaPredicted RBP18.43■□□□□ 0.54
KDM2B-216ENST00000543025 ABCB11O95342 1321 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 PVALEFA0A1B0GWK0 134 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 H0YIN7 160 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 TACC1O75410 805 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 FGFR1OPO95684 399 aaKnown RBP18.43■□□□□ 0.54
KDM2B-216ENST00000543025 SYF2O95926 243 aaKnown RBP18.43■□□□□ 0.54
KDM2B-216ENST00000543025 CCDC70Q6NSX1 233 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 GOLGA6L1Q8N7Z2 621 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 LARP4BQ92615 738 aaKnown RBP18.43■□□□□ 0.54
KDM2B-216ENST00000543025 PIGSQ96S52 555 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 SIK3Q9Y2K2 1263 aa18.43■□□□□ 0.54
KDM2B-216ENST00000543025 PDE2AO00408 941 aaPredicted RBP18.42■□□□□ 0.54
KDM2B-216ENST00000543025 PLEKP08567 350 aaPredicted RBP18.42■□□□□ 0.54
KDM2B-216ENST00000543025 BTDP43251 543 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 GRB10Q13322 594 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 MAN2A1Q16706 1144 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 KRT26Q7Z3Y9 468 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 CCDC84Q86UT8 332 aaPredicted RBP18.42■□□□□ 0.54
KDM2B-216ENST00000543025 SH2D4AQ9H788 454 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 VAT1LQ9HCJ6 419 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 BLOC1S4Q9NUP1 217 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 ARHGAP20Q9P2F6 1191 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 SNX12Q9UMY4 172 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 hCG_1984214I3L0E3 225 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 FXR2P51116 673 aaKnown RBP eCLIP18.42■□□□□ 0.546e-9■■□□□ 13.7
KDM2B-216ENST00000543025 CALCRLQ16602 461 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 TMEM266Q2M3C6 531 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 ZNF713Q8N859 430 aaPredicted RBP18.42■□□□□ 0.54
KDM2B-216ENST00000543025 CDK5RAP3Q96JB5 506 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 MTMR9Q96QG7 549 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 DEF6Q9H4E7 631 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 PCDHA13Q9Y5I0 950 aa18.42■□□□□ 0.54
KDM2B-216ENST00000543025 DDX60LQ5H9U9 1706 aaKnown RBP18.41■□□□□ 0.54
KDM2B-216ENST00000543025 SLX4Q8IY92 1834 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 MYMKA6NI61 221 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 KIF11P52732 1056 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 C2orf54Q08AI8 447 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 CCNI2Q6ZMN8 369 aaPredicted RBP18.41■□□□□ 0.54
KDM2B-216ENST00000543025 GUF1Q8N442 669 aaKnown RBP18.41■□□□□ 0.54
KDM2B-216ENST00000543025 CEP95Q96GE4 821 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 FAM207AQ9NSI2 230 aaPredicted RBP18.41■□□□□ 0.54
KDM2B-216ENST00000543025 CAPN6Q9Y6Q1 641 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 ZMYND10O75800 440 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 LCA5LO95447 670 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 PRLRP16471 622 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 LRRC63Q05C16 580 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 STYK1Q6J9G0 422 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 CREG2Q8IUH2 290 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 ZNF622Q969S3 477 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■■□□□ 12.4
KDM2B-216ENST00000543025 RAB34Q9BZG1 259 aa18.41■□□□□ 0.54
KDM2B-216ENST00000543025 PRPF6O94906 941 aaKnown RBP18.4■□□□□ 0.54
KDM2B-216ENST00000543025 ITIH3Q06033 890 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 TEX11Q8IYF3 940 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 AFAP1L1Q8TED9 768 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 SMCR8Q8TEV9 937 aaPredicted RBP18.4■□□□□ 0.54
KDM2B-216ENST00000543025 CRACR2AQ9BSW2 395 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 SELENOOQ9BVL4 669 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 RIOX1Q9H6W3 641 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 TMEM260Q9NX78 707 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 ZC3H4Q9UPT8 1303 aaKnown RBP18.4■□□□□ 0.54
KDM2B-216ENST00000543025 GPR75-ASB3A0A0A6YYF3 556 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 PPEF1O14829 653 aaPredicted RBP18.4■□□□□ 0.54
KDM2B-216ENST00000543025 EPHB6O15197 1021 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 BBOX1O75936 387 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
KDM2B-216ENST00000543025 DYMQ7RTS9 669 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 ZNF572Q7Z3I7 529 aaPredicted RBP18.4■□□□□ 0.54
KDM2B-216ENST00000543025 PNMA5Q96PV4 448 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 ALS2CR12Q96Q35 445 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 MMRN2Q9H8L6 949 aa18.4■□□□□ 0.54
KDM2B-216ENST00000543025 CDK5RAP2Q96SN8 1893 aa18.39■□□□□ 0.54
KDM2B-216ENST00000543025 LTBP1Q14766 1721 aa18.39■□□□□ 0.53
KDM2B-216ENST00000543025 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.53
KDM2B-216ENST00000543025 MYBL2P10244 700 aa18.39■□□□□ 0.53
KDM2B-216ENST00000543025 PLCG2P16885 1265 aa18.39■□□□□ 0.53
KDM2B-216ENST00000543025 ALDH1B1P30837 517 aa18.39■□□□□ 0.53
KDM2B-216ENST00000543025 C15orf52Q6ZUT6 534 aaKnown RBP18.39■□□□□ 0.53
KDM2B-216ENST00000543025 SRLQ86TD4 932 aa18.39■□□□□ 0.53
KDM2B-216ENST00000543025 MMGT1Q8N4V1 131 aa18.39■□□□□ 0.53
KDM2B-216ENST00000543025 RUBCNQ92622 972 aa18.39■□□□□ 0.53
KDM2B-216ENST00000543025 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
KDM2B-216ENST00000543025 FEZ2Q9UHY8 353 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms