RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 FAM173BQ6P4H8 233 aa23.72■■□□□ 1.39
OTUB1-211ENST00000543004 FBXO16Q8IX29 292 aaPredicted RBP23.72■■□□□ 1.39
OTUB1-211ENST00000543004 SH3TC2Q8TF17 1288 aa23.72■■□□□ 1.39
OTUB1-211ENST00000543004 MYH15Q9Y2K3 1946 aa23.71■■□□□ 1.39
OTUB1-211ENST00000543004 RGS20O76081 388 aa23.71■■□□□ 1.39
OTUB1-211ENST00000543004 ATP2B1P20020 1258 aa23.71■■□□□ 1.39
OTUB1-211ENST00000543004 CCND2P30279 289 aa23.71■■□□□ 1.39
OTUB1-211ENST00000543004 KATNBL1Q9H079 304 aa23.71■■□□□ 1.39
OTUB1-211ENST00000543004 EHMT1Q9H9B1 1298 aa23.71■■□□□ 1.39
OTUB1-211ENST00000543004 PRDM10Q9NQV6 1147 aa23.71■■□□□ 1.39
OTUB1-211ENST00000543004 SYNGAP1Q96PV0 1343 aa23.71■■□□□ 1.39
OTUB1-211ENST00000543004 FAM86B1E9PN63 330 aa23.7■■□□□ 1.39
OTUB1-211ENST00000543004 FAM86B2P0C5J1 330 aa23.7■■□□□ 1.39
OTUB1-211ENST00000543004 ZSCAN22P10073 491 aaPredicted RBP23.7■■□□□ 1.39
OTUB1-211ENST00000543004 NBR1Q14596 966 aa23.7■■□□□ 1.39
OTUB1-211ENST00000543004 STXBP2Q15833 593 aa23.7■■□□□ 1.39
OTUB1-211ENST00000543004 LETM2Q2VYF4 491 aa23.7■■□□□ 1.39
OTUB1-211ENST00000543004 PXYLP1Q8TE99 480 aa23.7■■□□□ 1.39
OTUB1-211ENST00000543004 PDGFCQ9NRA1 345 aa23.7■■□□□ 1.39
OTUB1-211ENST00000543004 TDP2O95551 362 aa23.7■■□□□ 1.38
OTUB1-211ENST00000543004 ITGB5P18084 799 aa23.7■■□□□ 1.38
OTUB1-211ENST00000543004 GRK4P32298 578 aa23.7■■□□□ 1.38
OTUB1-211ENST00000543004 TOB1P50616 345 aaPredicted RBP23.7■■□□□ 1.38
OTUB1-211ENST00000543004 TMEM63BQ5T3F8 832 aa23.7■■□□□ 1.38
OTUB1-211ENST00000543004 TRPV1Q8NER1 839 aa23.7■■□□□ 1.38
OTUB1-211ENST00000543004 UIMC1Q96RL1 719 aa23.7■■□□□ 1.38
OTUB1-211ENST00000543004 DOCK5Q9H7D0 1870 aa23.69■■□□□ 1.38
OTUB1-211ENST00000543004 BRD1O95696 1058 aa23.69■■□□□ 1.38
OTUB1-211ENST00000543004 CYP3A4P08684 503 aa23.69■■□□□ 1.38
OTUB1-211ENST00000543004 CACNB2Q08289 660 aaPredicted RBP23.69■■□□□ 1.38
OTUB1-211ENST00000543004 NEK8Q86SG6 692 aa23.69■■□□□ 1.38
OTUB1-211ENST00000543004 MSL3Q8N5Y2 521 aaKnown RBP23.69■■□□□ 1.38
OTUB1-211ENST00000543004 WDR11Q9BZH6 1224 aa23.69■■□□□ 1.38
OTUB1-211ENST00000543004 LOC102724159A0A0B4J2E5 919 aa23.68■■□□□ 1.38
OTUB1-211ENST00000543004 EIF3JO75822 258 aaKnown RBP23.68■■□□□ 1.38
OTUB1-211ENST00000543004 HMGCRP04035 888 aa23.68■■□□□ 1.38
OTUB1-211ENST00000543004 PTGS1P23219 599 aa23.68■■□□□ 1.38
OTUB1-211ENST00000543004 PWP2Q15269 919 aaKnown RBP23.68■■□□□ 1.38
OTUB1-211ENST00000543004 FOXD4L6Q3SYB3 417 aaPredicted RBP23.68■■□□□ 1.38
OTUB1-211ENST00000543004 FOXD4L3Q6VB84 417 aaPredicted RBP23.68■■□□□ 1.38
OTUB1-211ENST00000543004 SEPT14Q6ZU15 432 aa23.68■■□□□ 1.38
OTUB1-211ENST00000543004 SLAIN1Q8ND83 568 aa23.68■■□□□ 1.38
OTUB1-211ENST00000543004 MPHOSPH6Q99547 160 aaKnown RBP23.68■■□□□ 1.38
OTUB1-211ENST00000543004 ZHX1Q9UKY1 873 aaPredicted RBP23.68■■□□□ 1.38
OTUB1-211ENST00000543004 UBIAD1Q9Y5Z9 338 aa23.68■■□□□ 1.38
OTUB1-211ENST00000543004 F13A1P00488 732 aa23.67■■□□□ 1.38
OTUB1-211ENST00000543004 INHAP05111 366 aa23.67■■□□□ 1.38
OTUB1-211ENST00000543004 ZNF76P36508 570 aa23.67■■□□□ 1.38
OTUB1-211ENST00000543004 USP11P51784 963 aa23.67■■□□□ 1.38
OTUB1-211ENST00000543004 ACVR2BQ13705 512 aa23.67■■□□□ 1.38
OTUB1-211ENST00000543004 MFSD14CQ5VZR4 134 aa23.67■■□□□ 1.38
OTUB1-211ENST00000543004 TAPT1Q6NXT6 567 aa23.67■■□□□ 1.38
OTUB1-211ENST00000543004 TRMT44Q8IYL2 757 aaKnown RBP23.67■■□□□ 1.38
OTUB1-211ENST00000543004 IGLV3-22A0A075B6J6 115 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 B4DLN1 442 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 CCNT1O60563 726 aaKnown RBP23.66■■□□□ 1.38
OTUB1-211ENST00000543004 ZNF865P0CJ78 1059 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-211ENST00000543004 PRKAR2AP13861 404 aaKnown RBP23.66■■□□□ 1.38
OTUB1-211ENST00000543004 FBXO46Q6PJ61 603 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-211ENST00000543004 INPP4AQ96PE3 977 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-211ENST00000543004 MXRA8Q9BRK3 442 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 ABHD16BQ9H3Z7 469 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 CNPY2Q9Y2B0 182 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 SLC37A4O43826 429 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 MYCP01106 439 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-211ENST00000543004 ARP10275 920 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 CYBAP13498 195 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 CCND3P30281 292 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-211ENST00000543004 CIITAP33076 1130 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 ADCYAP1R1P41586 468 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 SEMA3FQ13275 785 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 CEP55Q53EZ4 464 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 MYSM1Q5VVJ2 828 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 XRRA1Q6P2D8 792 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 BRAPQ7Z569 592 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 LENG9Q96B70 501 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 CHAMP1Q96JM3 812 aa23.66■■□□□ 1.38
OTUB1-211ENST00000543004 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.65■■□□□ 1.38
OTUB1-211ENST00000543004 ADCY6O43306 1168 aa23.65■■□□□ 1.38
OTUB1-211ENST00000543004 ARIH2O95376 493 aa23.65■■□□□ 1.38
OTUB1-211ENST00000543004 SLC9C1Q4G0N8 1177 aa23.65■■□□□ 1.38
OTUB1-211ENST00000543004 PRR16Q569H4 304 aa23.65■■□□□ 1.38
OTUB1-211ENST00000543004 FTOQ9C0B1 505 aaKnown RBP eCLIP23.65■■□□□ 1.38
OTUB1-211ENST00000543004 VTA1Q9NP79 307 aa23.65■■□□□ 1.38
OTUB1-211ENST00000543004 JADE2Q9NQC1 790 aa23.65■■□□□ 1.38
OTUB1-211ENST00000543004 PCDHB6Q9Y5E3 794 aa23.65■■□□□ 1.38
OTUB1-211ENST00000543004 MEIS1O00470 390 aa23.64■■□□□ 1.38
OTUB1-211ENST00000543004 ZNF174Q15697 407 aa23.64■■□□□ 1.38
OTUB1-211ENST00000543004 CCDC144BQ3MJ40 725 aa23.64■■□□□ 1.38
OTUB1-211ENST00000543004 MAP3K21Q5TCX8 1036 aa23.64■■□□□ 1.38
OTUB1-211ENST00000543004 GJA10Q969M2 543 aa23.64■■□□□ 1.38
OTUB1-211ENST00000543004 LENG1Q96BZ8 264 aaPredicted RBP23.64■■□□□ 1.38
OTUB1-211ENST00000543004 ZSCAN16Q9H4T2 348 aaPredicted RBP23.64■■□□□ 1.38
OTUB1-211ENST00000543004 BCAS3Q9H6U6 928 aa23.64■■□□□ 1.38
OTUB1-211ENST00000543004 PKD2L1Q9P0L9 805 aa23.64■■□□□ 1.38
OTUB1-211ENST00000543004 CYP3A7-CYP3A51PA0A087WV96 503 aa23.63■■□□□ 1.37
OTUB1-211ENST00000543004 PDIA4P13667 645 aaKnown RBP23.63■■□□□ 1.37
OTUB1-211ENST00000543004 CYP3A7P24462 503 aa23.63■■□□□ 1.37
OTUB1-211ENST00000543004 MCM7P33993 719 aa23.63■■□□□ 1.37
OTUB1-211ENST00000543004 SP2Q02086 613 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms