RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 ANKRD54Q6NXT1 300 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 POTEGQ6S5H5 508 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 FBXO16Q8IX29 292 aaPredicted RBP4.01□□□□□ -1.77
CHD4-209ENST00000542717 ZDHHC14Q8IZN3 488 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 CPXCR1Q8N123 301 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 VGLL2Q8N8G2 317 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 FAM133AQ8N9E0 248 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 C8orf58Q8NAV2 365 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 OR6J1Q8NGC5 347 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 KLHDC4Q8TBB5 520 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 SEPT8Q92599 483 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 ACSF2Q96CM8 615 aaPredicted RBP4.01□□□□□ -1.77
CHD4-209ENST00000542717 LRIG1Q96JA1 1093 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 MKNK1Q9BUB5 465 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 PLVAPQ9BX97 442 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 TEX13BQ9BXU2 312 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 S1PR5Q9H228 398 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 EPC1Q9H2F5 836 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 POMKQ9H5K3 350 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 CYP26B1Q9NR63 512 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 PDGFCQ9NRA1 345 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 ZSCAN32Q9NX65 697 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 CDH22Q9UJ99 828 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 DUSP12Q9UNI6 340 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 Q9Y3F1 56 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 RAI2Q9Y5P3 530 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 BPTFQ12830 3046 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 CACNA1IQ9P0X4 2223 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 EMSYQ7Z589 1322 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ADGRA3Q8IWK6 1321 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ZZEF1O43149 2961 aa4□□□□□ -1.77
CHD4-209ENST00000542717 MYO18BQ8IUG5 2567 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ATG2AQ2TAZ0 1938 aa4□□□□□ -1.77
CHD4-209ENST00000542717 A0A1W2PRG0 241 aa4□□□□□ -1.77
CHD4-209ENST00000542717 USP17L12C9JPN9 530 aa4□□□□□ -1.77
CHD4-209ENST00000542717 USP17L21D6R901 530 aa4□□□□□ -1.77
CHD4-209ENST00000542717 J3QKU1 62 aa4□□□□□ -1.77
CHD4-209ENST00000542717 VWA5AO00534 786 aa4□□□□□ -1.77
CHD4-209ENST00000542717 FOXD2O60548 495 aaPredicted RBP4□□□□□ -1.77
CHD4-209ENST00000542717 KPNA6O60684 536 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ITGB1P05556 798 aa4□□□□□ -1.77
CHD4-209ENST00000542717 RETP07949 1114 aa4□□□□□ -1.77
CHD4-209ENST00000542717 WEE2P0C1S8 567 aa4□□□□□ -1.77
CHD4-209ENST00000542717 HOXB8P17481 243 aaPredicted RBP4□□□□□ -1.77
CHD4-209ENST00000542717 DNAJB1P25685 340 aa4□□□□□ -1.77
CHD4-209ENST00000542717 MTHFRP42898 656 aa4□□□□□ -1.77
CHD4-209ENST00000542717 NOVA1P51513 510 aaKnown RBP4□□□□□ -1.77
CHD4-209ENST00000542717 CNTN2Q02246 1040 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ZNF252P-AS1Q0IIN9 211 aa4□□□□□ -1.77
CHD4-209ENST00000542717 FLIIQ13045 1269 aa4□□□□□ -1.77
CHD4-209ENST00000542717 CCDC6Q16204 474 aa4□□□□□ -1.77
CHD4-209ENST00000542717 CSRP2Q16527 193 aa4□□□□□ -1.77
CHD4-209ENST00000542717 DUSP6Q16828 381 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ZNF618Q5T7W0 954 aa4□□□□□ -1.77
CHD4-209ENST00000542717 LAIR1Q6GTX8 287 aa4□□□□□ -1.77
CHD4-209ENST00000542717 GDF6Q6KF10 455 aaPredicted RBP4□□□□□ -1.77
CHD4-209ENST00000542717 SYCE2Q6PIF2 218 aa4□□□□□ -1.77
CHD4-209ENST00000542717 SLC4A10Q6U841 1118 aa4□□□□□ -1.77
CHD4-209ENST00000542717 METTL16Q86W50 562 aaKnown RBP4□□□□□ -1.77
CHD4-209ENST00000542717 CCDC146Q8IYE0 955 aa4□□□□□ -1.77
CHD4-209ENST00000542717 C12orf50Q8NA57 414 aaPredicted RBP4□□□□□ -1.77
CHD4-209ENST00000542717 KLHL23Q8NBE8 558 aa4□□□□□ -1.77
CHD4-209ENST00000542717 VN1R2Q8NFZ6 395 aa4□□□□□ -1.77
CHD4-209ENST00000542717 SPPL3Q8TCT6 385 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ATP8B4Q8TF62 1192 aa4□□□□□ -1.77
CHD4-209ENST00000542717 HNRNPLLQ8WVV9 542 aaKnown RBP4□□□□□ -1.77
CHD4-209ENST00000542717 GATA6Q92908 595 aa4□□□□□ -1.77
CHD4-209ENST00000542717 P2RX5Q93086 422 aa4□□□□□ -1.77
CHD4-209ENST00000542717 NSUN4Q96CB9 384 aaKnown RBP4□□□□□ -1.77
CHD4-209ENST00000542717 CDCA3Q99618 268 aaPredicted RBP4□□□□□ -1.77
CHD4-209ENST00000542717 SCNM1Q9BWG6 230 aa4□□□□□ -1.77
CHD4-209ENST00000542717 BCO2Q9BYV7 579 aa4□□□□□ -1.77
CHD4-209ENST00000542717 KATNBL1Q9H079 304 aa4□□□□□ -1.77
CHD4-209ENST00000542717 SH2D4AQ9H788 454 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ARHGEF10LQ9HCE6 1279 aa4□□□□□ -1.77
CHD4-209ENST00000542717 HOMER2Q9NSB8 354 aa4□□□□□ -1.77
CHD4-209ENST00000542717 FBXO28Q9NVF7 368 aa4□□□□□ -1.77
CHD4-209ENST00000542717 CACNA2D2Q9NY47 1150 aa4□□□□□ -1.77
CHD4-209ENST00000542717 LRP2BPQ9P2M1 347 aa4□□□□□ -1.77
CHD4-209ENST00000542717 WNT16Q9UBV4 365 aa4□□□□□ -1.77
CHD4-209ENST00000542717 SERPINB13Q9UIV8 391 aa4□□□□□ -1.77
CHD4-209ENST00000542717 FBXO4Q9UKT5 387 aa4□□□□□ -1.77
CHD4-209ENST00000542717 ZNF214Q9UL59 606 aaPredicted RBP4□□□□□ -1.77
CHD4-209ENST00000542717 COG6Q9Y2V7 657 aa4□□□□□ -1.77
CHD4-209ENST00000542717 GPSM3Q9Y4H4 160 aa4□□□□□ -1.77
CHD4-209ENST00000542717 RIPK3Q9Y572 518 aa4□□□□□ -1.77
CHD4-209ENST00000542717 KRBA1A5PL33 1030 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 SPDYE4A6NLX3 237 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 RSPH10B2B2RC85 870 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 F6X3S4 739 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 NARSO43776 548 aaKnown RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 LRP3O75074 770 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 TOP3BO95985 862 aaKnown RBP3.99□□□□□ -1.77
CHD4-209ENST00000542717 RSPH10BP0C881 870 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 THPOP40225 353 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 USP5P45974 858 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 GNAI1P63096 354 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 ITIH3Q06033 890 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 RASGRF1Q13972 1273 aa3.99□□□□□ -1.77
CHD4-209ENST00000542717 NONOQ15233 471 aaKnown RBP eCLIP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms