RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 AMNQ9BXJ7 453 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 BCAS3Q9H6U6 928 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 RAD50Q92878 1312 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 IFIT3O14879 490 aaKnown RBP23.13■■□□□ 1.29
DDX11-220ENST00000542244 ZBTB5O15062 677 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 ARHGEF15O94989 841 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 IQCF3P0C7M6 154 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 SUPT20HL2P0C7V6 817 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 GHRHRQ02643 423 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 HIC1Q14526 733 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 TCTN1Q2MV58 587 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 SKAP1Q86WV1 359 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 IWS1Q96ST2 819 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 MSRAQ9UJ68 235 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 PCDHA1Q9Y5I3 950 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 SLC4A7Q9Y6M7 1214 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 MYH6P13533 1939 aa23.13■■□□□ 1.29
DDX11-220ENST00000542244 SGSM2O43147 1006 aa23.12■■□□□ 1.29
DDX11-220ENST00000542244 KPNA6O60684 536 aa23.12■■□□□ 1.29
DDX11-220ENST00000542244 MYCLP12524 364 aaPredicted RBP23.12■■□□□ 1.29
DDX11-220ENST00000542244 SP2Q02086 613 aa23.12■■□□□ 1.29
DDX11-220ENST00000542244 RPUSD2Q8IZ73 545 aaKnown RBP23.12■■□□□ 1.29
DDX11-220ENST00000542244 PIBF1Q8WXW3 757 aa23.12■■□□□ 1.29
DDX11-220ENST00000542244 PDCD2LQ9BRP1 358 aa23.12■■□□□ 1.29
DDX11-220ENST00000542244 RIOX1Q9H6W3 641 aa23.12■■□□□ 1.29
DDX11-220ENST00000542244 CHD7Q9P2D1 2997 aa23.12■■□□□ 1.29
DDX11-220ENST00000542244 KIAA1217Q5T5P2 1943 aa23.12■■□□□ 1.29
DDX11-220ENST00000542244 B4DLN1 442 aa23.11■■□□□ 1.29
DDX11-220ENST00000542244 ZNF286BP0CG31 522 aa23.11■■□□□ 1.29
DDX11-220ENST00000542244 MRPL12P52815 198 aaKnown RBP23.11■■□□□ 1.29
DDX11-220ENST00000542244 TROAPQ12815 778 aa23.11■■□□□ 1.29
DDX11-220ENST00000542244 RAB30Q15771 203 aa23.11■■□□□ 1.29
DDX11-220ENST00000542244 BRDTQ58F21 947 aaPredicted RBP23.11■■□□□ 1.29
DDX11-220ENST00000542244 WNT8BQ93098 351 aa23.11■■□□□ 1.29
DDX11-220ENST00000542244 RFXAPO00287 272 aa23.1■■□□□ 1.29
DDX11-220ENST00000542244 EIF3JO75822 258 aaKnown RBP23.1■■□□□ 1.29
DDX11-220ENST00000542244 ATP2A2P16615 1042 aaKnown RBP23.1■■□□□ 1.29
DDX11-220ENST00000542244 ZNF200P98182 395 aaPredicted RBP23.1■■□□□ 1.29
DDX11-220ENST00000542244 CCDC85BQ15834 202 aaPredicted RBP23.1■■□□□ 1.29
DDX11-220ENST00000542244 PTGISQ16647 500 aa23.1■■□□□ 1.29
DDX11-220ENST00000542244 SPRED2Q7Z698 418 aa23.1■■□□□ 1.29
DDX11-220ENST00000542244 MB21D2Q8IYB1 491 aaPredicted RBP23.1■■□□□ 1.29
DDX11-220ENST00000542244 IGDCC4Q8TDY8 1250 aa23.1■■□□□ 1.29
DDX11-220ENST00000542244 MYL10Q9BUA6 226 aa23.1■■□□□ 1.29
DDX11-220ENST00000542244 HDAC6Q9UBN7 1215 aa23.1■■□□□ 1.29
DDX11-220ENST00000542244 MRVI1Q9Y6F6 885 aa23.1■■□□□ 1.29
DDX11-220ENST00000542244 U3KPZ7 1027 aaPredicted RBP23.1■■□□□ 1.29
DDX11-220ENST00000542244 BAZ2BQ9UIF8 2168 aaKnown RBP23.1■■□□□ 1.29
DDX11-220ENST00000542244 TET1Q8NFU7 2136 aa23.09■■□□□ 1.29
DDX11-220ENST00000542244 PTPN11Q06124 597 aaPredicted RBP23.09■■□□□ 1.29
DDX11-220ENST00000542244 PGM5Q15124 567 aa23.09■■□□□ 1.29
DDX11-220ENST00000542244 TMCO2Q7Z6W1 182 aaPredicted RBP23.09■■□□□ 1.29
DDX11-220ENST00000542244 ALG1Q9BT22 464 aa23.09■■□□□ 1.29
DDX11-220ENST00000542244 MAF1Q9H063 256 aa23.09■■□□□ 1.29
DDX11-220ENST00000542244 MTIF3Q9H2K0 278 aaKnown RBP23.09■■□□□ 1.29
DDX11-220ENST00000542244 SLC28A3Q9HAS3 691 aa23.09■■□□□ 1.29
DDX11-220ENST00000542244 TELO2Q9Y4R8 837 aa23.09■■□□□ 1.29
DDX11-220ENST00000542244 EPOPA6NHQ4 379 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 IGFBP4P22692 258 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 PSEN2P49810 448 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 TRDNQ13061 729 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 WTAPQ15007 396 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 VSIG10LQ86VR7 867 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 FCHSD1Q86WN1 690 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 MAP4K1Q92918 833 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 CERS4Q9HA82 394 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 RBM8AQ9Y5S9 174 aaKnown RBP23.08■■□□□ 1.29
DDX11-220ENST00000542244 TANC1Q9C0D5 1861 aa23.08■■□□□ 1.29
DDX11-220ENST00000542244 HAS3O00219 553 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 PITPNM1O00562 1244 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 CASTP20810 708 aaKnown RBP23.07■■□□□ 1.28
DDX11-220ENST00000542244 HSDL1Q3SXM5 330 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 TMEM67Q5HYA8 995 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 SESTD1Q86VW0 696 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 RETREG2Q8NC44 543 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 NCOA7Q8NI08 942 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 RUFY2Q8WXA3 655 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 EMID1Q96A84 441 aaPredicted RBP23.07■■□□□ 1.28
DDX11-220ENST00000542244 GAS2L1Q99501 681 aaPredicted RBP23.07■■□□□ 1.28
DDX11-220ENST00000542244 FTOQ9C0B1 505 aaKnown RBP eCLIP23.07■■□□□ 1.28
DDX11-220ENST00000542244 NOD1Q9Y239 953 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 PCDHA11Q9Y5I1 949 aa23.07■■□□□ 1.28
DDX11-220ENST00000542244 CA3P07451 260 aa23.06■■□□□ 1.28
DDX11-220ENST00000542244 MYSM1Q5VVJ2 828 aa23.06■■□□□ 1.28
DDX11-220ENST00000542244 PPP2R2DQ66LE6 453 aa23.06■■□□□ 1.28
DDX11-220ENST00000542244 TRAF7Q6Q0C0 670 aa23.06■■□□□ 1.28
DDX11-220ENST00000542244 DHX37Q8IY37 1157 aaKnown RBP23.06■■□□□ 1.28
DDX11-220ENST00000542244 GTF2IRD1Q9UHL9 959 aa23.06■■□□□ 1.28
DDX11-220ENST00000542244 GGPS1O95749 300 aa23.05■■□□□ 1.28
DDX11-220ENST00000542244 PFKMP08237 780 aa23.05■■□□□ 1.28
DDX11-220ENST00000542244 UBA1P22314 1058 aaKnown RBP23.05■■□□□ 1.28
DDX11-220ENST00000542244 LAMC2Q13753 1193 aa23.05■■□□□ 1.28
DDX11-220ENST00000542244 MFSD10Q14728 455 aa23.05■■□□□ 1.28
DDX11-220ENST00000542244 DGKDQ16760 1214 aa23.05■■□□□ 1.28
DDX11-220ENST00000542244 TRIM71Q2Q1W2 868 aaKnown RBP23.05■■□□□ 1.28
DDX11-220ENST00000542244 CELF3Q5SZQ8 465 aaKnown RBP23.05■■□□□ 1.28
DDX11-220ENST00000542244 RALYLQ86SE5 291 aaKnown RBP23.05■■□□□ 1.28
DDX11-220ENST00000542244 PPTC7Q8NI37 304 aa23.05■■□□□ 1.28
DDX11-220ENST00000542244 LY9Q9HBG7 655 aa23.05■■□□□ 1.28
DDX11-220ENST00000542244 PTPRSQ13332 1948 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms