RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 TANGO6Q9C0B7 1094 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 HOMER2Q9NSB8 354 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 RWDD2AQ9UIY3 292 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 KIAA1024Q9UPX6 916 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 NFIBO00712 420 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 MED24O75448 989 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 LMNB1P20700 586 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 NR1I3Q14994 352 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 WDR18Q9BV38 432 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 SPON1Q9HCB6 807 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 IMPACTQ9P2X3 320 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 CBFA2T2O43439 604 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 VCAM1P19320 739 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 FAM160B2Q86V87 743 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 IRF2BP1Q8IU81 584 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 KIAA0895Q8NCT3 520 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 KIAA1683Q9H0B3 1180 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 RAVER2Q9HCJ3 691 aaKnown RBP19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 SLC39A2Q9NP94 309 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 COL20A1Q9P218 1284 aa19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 R3HCC1Q9Y3T6 440 aaKnown RBP19.34■□□□□ 0.69
TMEM50B-210ENST00000542230 IGLV3-22A0A075B6J6 115 aa19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 NPHP3-ACAD11A0A0J9YXS1 232 aa19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 GCOM1H8Y6P7 765 aaPredicted RBP19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 MEIS1O00470 390 aa19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 NKRFO15226 690 aaKnown RBP eCLIP19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 FOSP01100 380 aaPredicted RBP19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 POLR2MP0CAP2 368 aa19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 TPD52L1Q16890 204 aaPredicted RBP19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 Q4G0T1 1027 aa19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 CCPG1Q9ULG6 757 aa19.33■□□□□ 0.69
TMEM50B-210ENST00000542230 A0A1B0GTH6 734 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 POTEFA5A3E0 1075 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 PLA2G6O60733 806 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 SSBP05455 408 aaKnown RBP eCLIP19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 POTEIP0CG38 1075 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 PSMC6P62333 389 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 CACNB1Q02641 598 aaPredicted RBP19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 RAD51AP2Q09MP3 1159 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 CT47A1Q5JQC4 288 aaPredicted RBP19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 NCAPH2Q6IBW4 605 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 POTEGQ6S5H5 508 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 POTEEQ6S8J3 1075 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 DDX12PQ92771 950 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 HOOK2Q96ED9 719 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 SLF1Q9BQI6 1058 aa19.33■□□□□ 0.68
TMEM50B-210ENST00000542230 FLOT1O75955 427 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 MYL1P05976 194 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 ZNF76P36508 570 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 KRT31Q15323 416 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 GPC2Q8N158 579 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 MAGEF1Q9HAY2 307 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 EXOC1Q9NV70 894 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 ADD3Q9UEY8 706 aaKnown RBP19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 EML1O00423 815 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 CIITAP33076 1130 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 DNTTIP2Q5QJE6 756 aaKnown RBP19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 CEP135Q66GS9 1140 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 CATSPER3Q86XQ3 398 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 PRPF38AQ8NAV1 312 aaKnown RBP19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 RPAP3Q9H6T3 665 aaPredicted RBP19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 STK17AQ9UEE5 414 aa19.32■□□□□ 0.68
TMEM50B-210ENST00000542230 WDR46O15213 610 aaKnown RBP19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 IDEP14735 1019 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 YBX3P16989 372 aaKnown RBP eCLIP19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 PTPRAP18433 802 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 SFPQP23246 707 aaKnown RBP eCLIP19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 GSDMDP57764 484 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 MUM1L1Q5H9M0 696 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 MOXD1Q6UVY6 613 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 CLEC4DQ8WXI8 215 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 PURBQ96QR8 312 aaKnown RBP19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 VPS16Q9H269 839 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 POLD4Q9HCU8 107 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 TRMT1Q9NXH9 659 aaKnown RBP19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 MRPL11Q9Y3B7 192 aaKnown RBP19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 ZHX2Q9Y6X8 837 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 SSC5DA1L4H1 1573 aa19.31■□□□□ 0.68
TMEM50B-210ENST00000542230 ICAM1P05362 532 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 SPATA31C1P0DKV0 1188 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 ADKP55263 362 aaKnown RBP19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 CYP4A11Q02928 519 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 LRRC41Q15345 812 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 DUSP9Q99956 384 aaKnown RBP19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 FGFBP2Q9BYJ0 223 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 TAB2Q9NYJ8 693 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 ZNF112Q9UJU3 913 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 VAV3Q9UKW4 847 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 CYP3A4P08684 503 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 ALAS1P13196 640 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 HMGCS2P54868 508 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 AMPD3Q01432 767 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 TBX2Q13207 712 aaPredicted RBP19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 ANKRD40Q6AI12 368 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 TTI2Q6NXR4 508 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 SLFN12Q8IYM2 578 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 SCYL3Q8IZE3 742 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 IL31RAQ8NI17 732 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 DNAJC19Q96DA6 116 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms