RNA–Protein interactions for RNA: ENST00000542108.1

KNOP1P1-201, Transcript of lysine rich nucleolar protein 1 pseudogene 1, humanhuman

BASIC

Gene KNOP1P1, Length 989 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P1-201ENST00000542108 SCLYQ96I15 445 aa15.37■□□□□ 0.05
KNOP1P1-201ENST00000542108 MTA3Q9BTC8 594 aa15.37■□□□□ 0.05
KNOP1P1-201ENST00000542108 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
KNOP1P1-201ENST00000542108 NOD1Q9Y239 953 aa15.37■□□□□ 0.05
KNOP1P1-201ENST00000542108 MRVI1Q9Y6F6 885 aa15.37■□□□□ 0.05
KNOP1P1-201ENST00000542108 SLC4A7Q9Y6M7 1214 aa15.37■□□□□ 0.05
KNOP1P1-201ENST00000542108 TANC1Q9C0D5 1861 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 GRXCR1A8MXD5 290 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 PPP1R11O60927 126 aaPredicted RBP15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 ACTN1P12814 892 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 TROAPQ12815 778 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 LAMC2Q13753 1193 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 CATIPQ7Z7H3 387 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 RETREG2Q8NC44 543 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 PPTC7Q8NI37 304 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 CAGE1Q8TC20 777 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 GAS2L1Q99501 681 aaPredicted RBP15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 MAP3K14Q99558 947 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 PDCD2LQ9BRP1 358 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 KATNAL1Q9BW62 490 aa15.36■□□□□ 0.05
KNOP1P1-201ENST00000542108 PNMA6FA0A0J9YX94 578 aa15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 POLR2MP0CAP2 368 aa15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 TMEM67Q5HYA8 995 aa15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 HOMER1Q86YM7 354 aa15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 VWCEQ96DN2 955 aa15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 SLC28A3Q9HAS3 691 aa15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 PCDHA11Q9Y5I1 949 aa15.35■□□□□ 0.05
KNOP1P1-201ENST00000542108 ZBBXA8MT70 800 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 DDAH1O94760 285 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 PARNO95453 639 aaKnown RBP15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 IQCF3P0C7M6 154 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 TGFB3P10600 412 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 HOXD8P13378 290 aaPredicted RBP15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 ATP2A2P16615 1042 aaKnown RBP15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 IRX6P78412 446 aaPredicted RBP15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 PGM5Q15124 567 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 PTGISQ16647 500 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 CHST3Q7LGC8 479 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 VSIG10LQ86VR7 867 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 DHX37Q8IY37 1157 aaKnown RBP15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 IGDCC4Q8TDY8 1250 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 AFAP1L1Q8TED9 768 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 KAT2BQ92831 832 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 PIGSQ96S52 555 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 RBM8AQ9Y5S9 174 aaKnown RBP15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 CHD7Q9P2D1 2997 aa15.34■□□□□ 0.05
KNOP1P1-201ENST00000542108 CYTH3O43739 400 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 STAM2O75886 525 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 F2P00734 622 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 CCND2P30279 289 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 HOXA13P31271 388 aaPredicted RBP15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 KIF5BP33176 963 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 ANTXR2P58335 489 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 RBL2Q08999 1139 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 SLC35G1Q2M3R5 365 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 DEFB128Q7Z7B8 93 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 PHOSPHO2Q8TCD6 241 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 SLC9A7Q96T83 725 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 SPZ1Q9BXG8 430 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 COL25A1Q9BXS0 654 aaPredicted RBP15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 SENP2Q9HC62 589 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 GTF2IRD1Q9UHL9 959 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 TAF6LQ9Y6J9 622 aa15.33■□□□□ 0.04
KNOP1P1-201ENST00000542108 GBF1Q92538 1859 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 PPFIA4O75335 1185 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 RGS20O76081 388 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 BAIAP3O94812 1187 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 MYCLP12524 364 aaPredicted RBP15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 CHMP4BP1P59074 171 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 GDF6Q6KF10 455 aaPredicted RBP15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 CASC1Q6TDU7 716 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 TMTC2Q8N394 836 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 C7orf31Q8N865 590 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 CTCFLQ8NI51 663 aaPredicted RBP15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 TMEM87BQ96K49 555 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 NKX2-4Q9H2Z4 354 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 PRDM12Q9H4Q4 367 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 YBX2Q9Y2T7 364 aaKnown RBP15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 FRMPD4Q14CM0 1322 aa15.32■□□□□ 0.04
KNOP1P1-201ENST00000542108 HAS3O00219 553 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 MCM5P33992 734 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 PSEN2P49810 448 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 GNAQP50148 359 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 MFSD10Q14728 455 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 GNPTABQ3T906 1256 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 MYSM1Q5VVJ2 828 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 PPP2R2DQ66LE6 453 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 ZNF654Q8IZM8 581 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 SPATA33Q96N06 139 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 CTAGE1Q96RT6 745 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 FTOQ9C0B1 505 aaKnown RBP eCLIP15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 SCN5AQ14524 2016 aa15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 BAZ2BQ9UIF8 2168 aaKnown RBP15.31■□□□□ 0.04
KNOP1P1-201ENST00000542108 GGPS1O95749 300 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms