RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 CWC22Q9HCG8 908 aaKnown RBP7.69□□□□□ -1.18
SUDS3-202ENST00000541280 METTL5Q9NRN9 209 aaKnown RBP7.69□□□□□ -1.18
SUDS3-202ENST00000541280 KIF7Q2M1P5 1343 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 THSD7AQ9UPZ6 1657 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 PLEKHG2Q9H7P9 1386 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 CRYBG1Q9Y4K1 1723 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 TNS2Q63HR2 1409 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 NME1P15531 152 aaKnown RBP7.68□□□□□ -1.18
SUDS3-202ENST00000541280 POLR2BP30876 1174 aaKnown RBP7.68□□□□□ -1.18
SUDS3-202ENST00000541280 TRHRP34981 398 aaPredicted RBP7.68□□□□□ -1.18
SUDS3-202ENST00000541280 SNX17Q15036 470 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 TXNRD1Q16881 649 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 AMOTQ4VCS5 1084 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 TIGD5Q53EQ6 642 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 SPOCD1Q6ZMY3 1216 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 SPPL2CQ8IUH8 684 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 KIAA0825Q8IV33 1275 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 TMEM87AQ8NBN3 555 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 NKD1Q969G9 470 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 DIRC2Q96SL1 478 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 EBF1Q9UH73 591 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 PCDH11XQ9BZA7 1347 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 PCDH11YQ9BZA8 1340 aa7.68□□□□□ -1.18
SUDS3-202ENST00000541280 KCNQ2O43526 872 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 HSP90AB1P08238 724 aaKnown RBP7.67□□□□□ -1.18
SUDS3-202ENST00000541280 TNNT2P45379 298 aaPredicted RBP7.67□□□□□ -1.18
SUDS3-202ENST00000541280 FANCCQ00597 558 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 R3HDM1Q15032 1099 aaKnown RBP7.67□□□□□ -1.18
SUDS3-202ENST00000541280 GK5Q6ZS86 529 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 C1QL4Q86Z23 238 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 LINC00116Q8NCU8 138 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 TOX2Q96NM4 488 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 SPON2Q9BUD6 331 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 SLC6A17Q9H1V8 727 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 DCP1AQ9NPI6 582 aaPredicted RBP7.67□□□□□ -1.18
SUDS3-202ENST00000541280 STK32BQ9NY57 414 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 NPC1L1Q9UHC9 1359 aa7.67□□□□□ -1.18
SUDS3-202ENST00000541280 CLEC3AO75596 197 aa7.66□□□□□ -1.18
SUDS3-202ENST00000541280 ZNF76P36508 570 aa7.66□□□□□ -1.18
SUDS3-202ENST00000541280 EIF4A2Q14240 407 aaKnown RBP7.66□□□□□ -1.18
SUDS3-202ENST00000541280 PLEKHO1Q53GL0 409 aaPredicted RBP7.66□□□□□ -1.18
SUDS3-202ENST00000541280 TMC3Q7Z5M5 1100 aa7.66□□□□□ -1.18
SUDS3-202ENST00000541280 IFNL2Q8IZJ0 200 aa7.66□□□□□ -1.18
SUDS3-202ENST00000541280 SMARCC1Q92922 1105 aaPredicted RBP7.66□□□□□ -1.18
SUDS3-202ENST00000541280 SHISA4Q96DD7 197 aa7.66□□□□□ -1.18
SUDS3-202ENST00000541280 TCTN2Q96GX1 697 aa7.66□□□□□ -1.18
SUDS3-202ENST00000541280 YBX2Q9Y2T7 364 aaKnown RBP7.66□□□□□ -1.18
SUDS3-202ENST00000541280 AKAP12Q02952 1782 aa7.66□□□□□ -1.18
SUDS3-202ENST00000541280 SIGLEC6O43699 453 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 C1QTNF9P0C862 333 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 GLDCP23378 1020 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 KIR2DL1P43626 348 aaPredicted RBP7.65□□□□□ -1.18
SUDS3-202ENST00000541280 KIR2DL2P43627 348 aaPredicted RBP7.65□□□□□ -1.18
SUDS3-202ENST00000541280 SNW1Q13573 536 aaKnown RBP7.65□□□□□ -1.18
SUDS3-202ENST00000541280 SLC15A2Q16348 729 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 INTS3Q68E01 1043 aaKnown RBP7.65□□□□□ -1.18
SUDS3-202ENST00000541280 MON2Q7Z3U7 1717 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 TMEM192Q8IY95 271 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 BACH2Q9BYV9 841 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 ANTXR1Q9H6X2 564 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 SPON1Q9HCB6 807 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 CD320Q9NPF0 282 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 PRR13Q9NZ81 148 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 ZNRF3Q9ULT6 936 aa7.65□□□□□ -1.18
SUDS3-202ENST00000541280 COL18A1P39060 1754 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 USP54Q70EL1 1684 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 TMEM82A0PJX8 343 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 NOTOA8MTQ0 251 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 NFIBO00712 420 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 IMPDH2P12268 514 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 VAMP1P23763 118 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 CFPP27918 469 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 MCM4P33991 863 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 MTHFSP49914 203 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 BBS9Q3SYG4 887 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 FBLN7Q53RD9 439 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 LCE1DQ5T752 114 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 TAB3Q8N5C8 712 aaPredicted RBP7.64□□□□□ -1.19
SUDS3-202ENST00000541280 INTS4Q96HW7 963 aaKnown RBP7.64□□□□□ -1.19
SUDS3-202ENST00000541280 PRDM14Q9GZV8 571 aa7.64□□□□□ -1.19
SUDS3-202ENST00000541280 IGSF1Q8N6C5 1336 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 ERVV-2B6SEH9 535 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 CYP27B1O15528 508 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 DIAPH1O60610 1272 aaKnown RBP7.63□□□□□ -1.19
SUDS3-202ENST00000541280 PEX10O60683 326 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 PRAMEF1O95521 474 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 IL13P35225 146 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 PCBP3P57721 371 aaKnown RBP7.63□□□□□ -1.19
SUDS3-202ENST00000541280 PTF1AQ7RTS3 328 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 MAP6Q96JE9 813 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 SLC9A7Q96T83 725 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 FOXP3Q9BZS1 431 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 TCFL5Q9UL49 500 aa7.63□□□□□ -1.19
SUDS3-202ENST00000541280 NRDCO43847 1150 aa7.62□□□□□ -1.19
SUDS3-202ENST00000541280 PHKG2P15735 406 aa7.62□□□□□ -1.19
SUDS3-202ENST00000541280 ZEB1P37275 1124 aaPredicted RBP7.62□□□□□ -1.19
SUDS3-202ENST00000541280 MFAP1P55081 439 aaKnown RBP7.62□□□□□ -1.19
SUDS3-202ENST00000541280 C1orf141Q5JVX7 400 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms