RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 NBPF20Q3BBV1 942 aa17.13■□□□□ 0.33
DDX11-217ENST00000540935 TMEM240Q5SV17 173 aa17.13■□□□□ 0.33
DDX11-217ENST00000540935 C16orf59Q7L2K0 433 aa17.13■□□□□ 0.33
DDX11-217ENST00000540935 RRP36Q96EU6 259 aaKnown RBP17.13■□□□□ 0.33
DDX11-217ENST00000540935 SEC63Q9UGP8 760 aaKnown RBP17.13■□□□□ 0.33
DDX11-217ENST00000540935 DDX41Q9UJV9 622 aaKnown RBP17.13■□□□□ 0.33
DDX11-217ENST00000540935 BAZ2BQ9UIF8 2168 aaKnown RBP17.12■□□□□ 0.33
DDX11-217ENST00000540935 TGFB3P10600 412 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 MYCLP12524 364 aaPredicted RBP17.12■□□□□ 0.33
DDX11-217ENST00000540935 CCND2P30279 289 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 HOXA13P31271 388 aaPredicted RBP17.12■□□□□ 0.33
DDX11-217ENST00000540935 LAMC2Q13753 1193 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 PGM5Q15124 567 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 DGKDQ16760 1214 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 FAM47CQ5HY64 1035 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 RASIP1Q5U651 963 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 VSIG10LQ86VR7 867 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 RPUSD2Q8IZ73 545 aaKnown RBP17.12■□□□□ 0.33
DDX11-217ENST00000540935 AFG1LQ8WV93 481 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
DDX11-217ENST00000540935 TRMT13Q9NUP7 481 aaKnown RBP17.12■□□□□ 0.33
DDX11-217ENST00000540935 CDC45O75419 566 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 STAM2O75886 525 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 FGBP02675 491 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 ZNF365Q70YC5 407 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 PPTC7Q8NI37 304 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 HERVK_113Q902F9 699 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 GUCD1Q96NT3 240 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 MYL10Q9BUA6 226 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 SLC12A7Q9Y666 1083 aa17.11■□□□□ 0.33
DDX11-217ENST00000540935 PFKMP08237 780 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 ACRP10323 421 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 CCL23P55773 120 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 SESTD1Q86VW0 696 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 SGMS1Q86VZ5 419 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 FCHSD1Q86WN1 690 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 DHX37Q8IY37 1157 aaKnown RBP17.1■□□□□ 0.33
DDX11-217ENST00000540935 SLC17A8Q8NDX2 589 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 CUL5Q93034 780 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 FAM161BQ96MY7 647 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 KATNAL1Q9BW62 490 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 WNT8AQ9H1J5 351 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 UMODL1Q5DID0 1318 aa17.1■□□□□ 0.33
DDX11-217ENST00000540935 PITPNM1O00562 1244 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 RGS20O76081 388 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 CYP2C9P11712 490 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 DNAJB2P25686 324 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 BFSP2Q13515 415 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 SYNE3Q6ZMZ3 975 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 NOD1Q9Y239 953 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 FRMPD4Q14CM0 1322 aa17.09■□□□□ 0.33
DDX11-217ENST00000540935 PIK3CDO00329 1044 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 PPFIA4O75335 1185 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 RFC2P35250 354 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 KRT32Q14532 448 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 CELF3Q5SZQ8 465 aaKnown RBP17.08■□□□□ 0.32
DDX11-217ENST00000540935 MYSM1Q5VVJ2 828 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.32
DDX11-217ENST00000540935 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 FANCBQ8NB91 859 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 PIBF1Q8WXW3 757 aa17.08■□□□□ 0.32
DDX11-217ENST00000540935 CDX2Q99626 313 aaPredicted RBP17.08■□□□□ 0.32
DDX11-217ENST00000540935 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
DDX11-217ENST00000540935 PLEKHA8P1O95397 391 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 HOXD8P13378 290 aaPredicted RBP17.07■□□□□ 0.32
DDX11-217ENST00000540935 PTGISQ16647 500 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 XRRA1Q6P2D8 792 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 SKAP1Q86WV1 359 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 IL31RAQ8NI17 732 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 CAGE1Q8TC20 777 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 KAT2BQ92831 832 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 SPATA33Q96N06 139 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 MYH7BA7E2Y1 1941 aa17.07■□□□□ 0.32
DDX11-217ENST00000540935 GGPS1O95749 300 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 F2P00734 622 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
DDX11-217ENST00000540935 ICAM3P32942 547 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 CHMP4BP1P59074 171 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 RAB30Q15771 203 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
DDX11-217ENST00000540935 OTOP2Q7RTS6 562 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 C7orf31Q8N865 590 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 TIFAQ96CG3 184 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 SCLYQ96I15 445 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 INPP4AQ96PE3 977 aaPredicted RBP17.06■□□□□ 0.32
DDX11-217ENST00000540935 MLXIPQ9HAP2 919 aa17.06■□□□□ 0.32
DDX11-217ENST00000540935 RBM28Q9NW13 759 aaKnown RBP17.06■□□□□ 0.32
DDX11-217ENST00000540935 LAMA2P24043 3122 aaKnown RBP17.05■□□□□ 0.32
DDX11-217ENST00000540935 MEIS2O14770 477 aa17.05■□□□□ 0.32
DDX11-217ENST00000540935 IQCF3P0C7M6 154 aa17.05■□□□□ 0.32
DDX11-217ENST00000540935 ACTN1P12814 892 aa17.05■□□□□ 0.32
DDX11-217ENST00000540935 RXRAP19793 462 aa17.05■□□□□ 0.32
DDX11-217ENST00000540935 UBA1P22314 1058 aaKnown RBP17.05■□□□□ 0.32
DDX11-217ENST00000540935 PSEN2P49810 448 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms