RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SARS	P49591	514 aa	Known RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PPAT	Q06203	517 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DPYD	Q12882	1025 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CCL15	Q16663	113 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DGKH	Q86XP1	1220 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MCF2L2	Q86YR7	1114 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MB21D1	Q8N884	522 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PPM1E	Q8WY54	764 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TMEM39B	Q9GZU3	492 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SPC25	Q9HBM1	224 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ADD3	Q9UEY8	706 aa	Known RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CTNND2	Q9UQB3	1225 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	COL5A3	P25940	1745 aa	Predicted RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FAM237A	A0A1B0GTK4	181 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ADM5	C9JUS6	153 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ACTN4	O43707	911 aa	Known RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ORC4	O43929	436 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TBC1D12	O60347	775 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SLC34A2	O95436	690 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MYBL2	P10244	700 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PTPRE	P23469	700 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CALML3	P27482	149 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SPP2	Q13103	211 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NTRK3	Q16288	839 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	APOBEC3H	Q6NTF7	200 aa	Known RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CTR9	Q6PD62	1173 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DCAF4	Q8WV16	495 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NAP1L4	Q99733	375 aa	Known RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MKRN1	Q9UHC7	482 aa	Known RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SYNRG	Q9UMZ2	1314 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ARFGEF2	Q9Y6D5	1785 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZNF185	O15231	689 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PPFIA4	O75335	1185 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PRDM1	O75626	825 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GDF11	O95390	407 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	BMP3	P12645	472 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GUCY2C	P25092	1073 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	KRT9	P35527	623 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	KCTD2	Q14681	263 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FILIP1L	Q4L180	1135 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SPATA1	Q5VX52	437 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FBXW10	Q5XX13	1052 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FBXL16	Q8N461	479 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CERS5	Q8N5B7	392 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PAGR1	Q9BTK6	254 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DEF6	Q9H4E7	631 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MRPL11	Q9Y3B7	192 aa	Known RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SAMM50	Q9Y512	469 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DDAH1	O94760	285 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ATP1A1	P05023	1023 aa	Known RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	IBSP	P21815	317 aa	Predicted RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PPIL2	Q13356	520 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	STIM1	Q13586	685 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NEDD1	Q8NHV4	660 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GML	Q99445	158 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GBP3	Q9H0R5	595 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZSWIM5	Q9P217	1185 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NYAP2	Q9P242	653 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZBTB21	Q9ULJ3	1066 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SYNPO2	Q9UMS6	1093 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NUP98	P52948	1817 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	AFDN	P55196	1824 aa	Known RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	WDR46	O15213	610 aa	Known RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FMNL1	O95466	1100 aa	Predicted RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZBTB48	P10074	688 aa	Predicted RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GNA11	P29992	359 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CAP2	P40123	477 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MATR3	P43243	847 aa	Known RBP eCLIP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	KRT31	Q15323	416 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	WHAMMP3	Q1A5X7	153 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CAGE1	Q8TC20	777 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	IGDCC4	Q8TDY8	1250 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	STAG1	Q8WVM7	1258 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	KAT2B	Q92831	832 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	C6orf50	Q9HD87	102 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FEM1B	Q9UK73	627 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	HPCAL4	Q9UM19	191 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	WNT7A	O00755	349 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PRKAB2	O43741	272 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RPS6KA5	O75582	802 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	EARS2	Q5JPH6	523 aa	Known RBP	6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	C16orf86	Q6ZW13	317 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TADA2B	Q86TJ2	420 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PAGE5	Q96GU1	130 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CRACR2A	Q9BSW2	395 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ACBD3	Q9H3P7	528 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	LY9	Q9HBG7	655 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	VAT1L	Q9HCJ6	419 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CREBZF	Q9NS37	354 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ABHD10	Q9NUJ1	306 aa		6.3	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GSG1L2	A8MUP6	293 aa		6.29	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PRPF6	O94906	941 aa	Known RBP	6.29	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MMP1	P03956	469 aa		6.29	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ERCC5	P28715	1186 aa	Predicted RBP	6.29	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PBX1	P40424	430 aa		6.29	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CUL4B	Q13620	913 aa		6.29	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZNF174	Q15697	407 aa		6.29	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms