RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 DHX37Q8IY37 1157 aaKnown RBP12□□□□□ -0.49
CDCA3-208ENST00000540683 STAG2Q8N3U4 1231 aa12□□□□□ -0.49
CDCA3-208ENST00000540683 GIMAP8Q8ND71 665 aaPredicted RBP12□□□□□ -0.49
CDCA3-208ENST00000540683 IGDCC4Q8TDY8 1250 aa12□□□□□ -0.49
CDCA3-208ENST00000540683 CDHR1Q96JP9 859 aa12□□□□□ -0.49
CDCA3-208ENST00000540683 GLT8D2Q9H1C3 349 aa12□□□□□ -0.49
CDCA3-208ENST00000540683 IL25Q9H293 177 aa12□□□□□ -0.49
CDCA3-208ENST00000540683 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
CDCA3-208ENST00000540683 IL23AQ9NPF7 189 aa12□□□□□ -0.49
CDCA3-208ENST00000540683 RBM28Q9NW13 759 aaKnown RBP12□□□□□ -0.49
CDCA3-208ENST00000540683 LAMA3Q16787 3333 aa12□□□□□ -0.49
CDCA3-208ENST00000540683 LCTP09848 1927 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 SLC27A2O14975 620 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 REC8O95072 547 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 FGD1P98174 961 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 RAB30Q15771 203 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 FAM47CQ5HY64 1035 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 CREB3L3Q68CJ9 461 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 PPTC7Q8NI37 304 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 SMARCC2Q8TAQ2 1214 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 CAGE1Q8TC20 777 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 PURBQ96QR8 312 aaKnown RBP11.99□□□□□ -0.49
CDCA3-208ENST00000540683 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 LSG1Q9H089 658 aaKnown RBP11.99□□□□□ -0.49
CDCA3-208ENST00000540683 CPVLQ9H3G5 476 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 LY9Q9HBG7 655 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 KIAA1217Q5T5P2 1943 aa11.99□□□□□ -0.49
CDCA3-208ENST00000540683 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 EPB41L2O43491 1005 aaKnown RBP11.98□□□□□ -0.49
CDCA3-208ENST00000540683 PPFIA4O75335 1185 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 FGBP02675 491 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
CDCA3-208ENST00000540683 RCAN1P53805 252 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 NEDD9Q14511 834 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 NECTIN1Q15223 517 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 CCDC62Q6P9F0 684 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 VSIG10LQ86VR7 867 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 SESTD1Q86VW0 696 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 SGMS1Q86VZ5 419 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
CDCA3-208ENST00000540683 NEK1Q96PY6 1258 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 PIGSQ96S52 555 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 PDCD2LQ9BRP1 358 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 MTMR10Q9NXD2 777 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 MSRAQ9UJ68 235 aa11.98□□□□□ -0.49
CDCA3-208ENST00000540683 PIK3CDO00329 1044 aa11.97□□□□□ -0.49
CDCA3-208ENST00000540683 NOP56O00567 594 aaKnown RBP11.97□□□□□ -0.49
CDCA3-208ENST00000540683 SH2B2O14492 632 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-208ENST00000540683 B4GALT4O60513 344 aa11.97□□□□□ -0.49
CDCA3-208ENST00000540683 MYCLP12524 364 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-208ENST00000540683 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
CDCA3-208ENST00000540683 DHX32Q7L7V1 743 aaKnown RBP11.97□□□□□ -0.49
CDCA3-208ENST00000540683 NLRX1Q86UT6 975 aa11.97□□□□□ -0.49
CDCA3-208ENST00000540683 C7orf31Q8N865 590 aa11.97□□□□□ -0.49
CDCA3-208ENST00000540683 TNPO1Q92973 898 aaKnown RBP11.97□□□□□ -0.49
CDCA3-208ENST00000540683 NOC4LQ9BVI4 516 aaKnown RBP11.97□□□□□ -0.49
CDCA3-208ENST00000540683 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
CDCA3-208ENST00000540683 MLXIPQ9HAP2 919 aa11.97□□□□□ -0.49
CDCA3-208ENST00000540683 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
CDCA3-208ENST00000540683 SZT2Q5T011 3432 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 MAFGO15525 162 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 MMP3P08254 477 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 GNAT1P11488 350 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 CSF2RAP15509 400 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 PSMA5P28066 241 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 ARHGAP1Q07960 439 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 PGM5Q15124 567 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 LY6KQ17RY6 165 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 ERICH6BQ5W0A0 696 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 MCTP2Q6DN12 878 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 CHST3Q7LGC8 479 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 FCHSD1Q86WN1 690 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 FANCBQ8NB91 859 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 AFG1LQ8WV93 481 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 HERVK_113Q902F9 699 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 PSTPIP2Q9H939 334 aa11.96□□□□□ -0.49
CDCA3-208ENST00000540683 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.5
CDCA3-208ENST00000540683 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 FIBPO43427 364 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 EFCAB14O75071 495 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-208ENST00000540683 RPLP2P05387 115 aaKnown RBP11.95□□□□□ -0.5
CDCA3-208ENST00000540683 ITGB8P26012 769 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 CYP2C18P33260 490 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 ANTXR2P58335 489 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 PSMC6P62333 389 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 PTGISQ16647 500 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
CDCA3-208ENST00000540683 PCNX4Q63HM2 1172 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 PPP1R18Q6NYC8 613 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 AFAP1L1Q8TED9 768 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 CCDC12Q8WUD4 166 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-208ENST00000540683 TBC1D5Q92609 795 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 SPATA33Q96N06 139 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms