RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 RNF8O76064 485 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 NLRP12P59046 1061 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TDRD12Q587J7 1177 aaKnown RBP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 ARMC3Q5W041 872 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 LCA5Q86VQ0 697 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 RUNDC3BQ96NL0 473 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 CASZ1Q86V15 1759 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 MYO3BQ8WXR4 1341 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TNRC6CQ9HCJ0 1690 aaKnown RBP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 KRT2P35908 639 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 RBM5P52756 815 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 KIF5AQ12840 1032 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 VWA3BQ502W6 1294 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 VSIG1Q86XK7 387 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 RAB34Q9BZG1 259 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 UBA5Q9GZZ9 404 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TNKSO95271 1327 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 NR1I2O75469 434 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 SYKP43405 635 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 RESP18Q5W5W9 173 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 MSL3Q8N5Y2 521 aaKnown RBP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 STAMBPL1Q96FJ0 436 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 PPP1R13BQ96KQ4 1090 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 AATFQ9NY61 560 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 NOP53Q9NZM5 478 aaKnown RBP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 KIAA1468Q9P260 1216 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 MTUS1Q9ULD2 1270 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 SBF2Q86WG5 1849 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 KCNQ2O43526 872 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 SEC23AQ15436 765 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 CRY2Q49AN0 593 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 HHATQ5VTY9 493 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 CACTINQ8WUQ7 758 aaKnown RBP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 ARHGEF1Q92888 912 aaKnown RBP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TRIM11Q96F44 468 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 EPC1Q9H2F5 836 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 SCOCQ9UIL1 159 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TSPY2A6NKD2 308 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 N4BP3O15049 544 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 POLR3DP05423 398 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TSPY3P0CV98 308 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TSPY8P0CW00 308 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TSPY1Q01534 308 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 PACS2Q86VP3 889 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 PLA2G4DQ86XP0 818 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 KLC4Q9NSK0 619 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 TUBA8Q9NY65 449 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-214ENST00000540109 LRRC37AA6NMS7 1700 aa6.64□□□□□ -1.35
PTPRD-214ENST00000540109 ACTN4O43707 911 aaKnown RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 GYG1P46976 350 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 SLC8A3P57103 927 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 MYL5Q02045 173 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 TRIM58Q8NG06 486 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 FAM163AQ96GL9 167 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 GGA1Q9UJY5 639 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 TRIM75PA6NK02 468 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 LAD1O00515 517 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 ZNF189O75820 626 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 CTDSPL2Q05D32 466 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 CHST3Q7LGC8 479 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 CEP70Q8NHQ1 597 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 ANKIB1Q9P2G1 1089 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 TMA7Q9Y2S6 64 aaKnown RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 KRT18P05783 430 aaKnown RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 PARP9Q8IXQ6 854 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 DIS3L2Q8IYB7 885 aaKnown RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 ZNF280CQ8ND82 737 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 KCNV2Q8TDN2 545 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 CELF1Q92879 486 aaKnown RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 HOOK2Q96ED9 719 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 NKIRAS1Q9NYS0 192 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 HPSEQ9Y251 543 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 IKBKGQ9Y6K9 419 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 MINDY4BA8MYZ0 360 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 CHGBP05060 677 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 CUL3Q13618 768 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 SWT1Q5T5J6 900 aaKnown RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 GET4Q7L5D6 327 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 ILDR1Q86SU0 546 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 MLKLQ8NB16 471 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 KAT14Q9H8E8 782 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 MAGEF1Q9HAY2 307 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 TUBE1Q9UJT0 475 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 RGPD3A6NKT7 1758 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 RGPD4Q7Z3J3 1758 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 AFF2P51816 1311 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 MYL1P05976 194 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 IL1R1P14778 569 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 FAM133BQ5BKY9 247 aaKnown RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 GRAMD4Q6IC98 578 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 TMTC3Q6ZXV5 915 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 APBB1IPQ7Z5R6 666 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 NME8Q8N427 588 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 SNRNP27Q8WVK2 155 aaKnown RBP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 PFDN4Q9NQP4 134 aa6.63□□□□□ -1.35
PTPRD-214ENST00000540109 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPRD-214ENST00000540109 ZNF202O95125 648 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 IDEP14735 1019 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 ABCD1P33897 745 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms