RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 PWP2Q15269 919 aaKnown RBP14.87□□□□□ -0.03
CCDC42-202ENST00000539522 GJC2Q5T442 439 aaPredicted RBP14.87□□□□□ -0.03
CCDC42-202ENST00000539522 PCNX4Q63HM2 1172 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 TEX2Q8IWB9 1127 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 DIS3L2Q8IYB7 885 aaKnown RBP14.87□□□□□ -0.03
CCDC42-202ENST00000539522 CCDC12Q8WUD4 166 aaPredicted RBP14.87□□□□□ -0.03
CCDC42-202ENST00000539522 C8orf76Q96K31 380 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 IWS1Q96ST2 819 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 SMC3Q9UQE7 1217 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 TELO2Q9Y4R8 837 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
CCDC42-202ENST00000539522 DNAH12Q6ZR08 3092 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 IGLV3-22A0A075B6J6 115 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 FAM86B1E9PN63 330 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 CTAGE5O15320 804 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 FAM86B2P0C5J1 330 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 CCL5P13501 91 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 ADCYAP1R1P41586 468 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 SP2Q02086 613 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 CCDC144BQ3MJ40 725 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 MFSD14CQ5VZR4 134 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 GALNT17Q6IS24 598 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 CCDC62Q6P9F0 684 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 LENG9Q96B70 501 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 INPP4AQ96PE3 977 aaPredicted RBP14.86□□□□□ -0.03
CCDC42-202ENST00000539522 ABHD16BQ9H3Z7 469 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 UBIAD1Q9Y5Z9 338 aa14.86□□□□□ -0.03
CCDC42-202ENST00000539522 FOSP01100 380 aaPredicted RBP14.85□□□□□ -0.03
CCDC42-202ENST00000539522 CYP3A4P08684 503 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 MYCLP12524 364 aaPredicted RBP14.85□□□□□ -0.03
CCDC42-202ENST00000539522 SMPD1P17405 629 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 MNX1P50219 401 aaPredicted RBP14.85□□□□□ -0.03
CCDC42-202ENST00000539522 ARHGAP4P98171 946 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 ANO1Q5XXA6 986 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 COPS5Q92905 334 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 WDR11Q9BZH6 1224 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC42-202ENST00000539522 GLT8D2Q9H1C3 349 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 VTA1Q9NP79 307 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 RTEL1Q9NZ71 1219 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 NRBP1Q9UHY1 535 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 ZHX1Q9UKY1 873 aaPredicted RBP14.85□□□□□ -0.03
CCDC42-202ENST00000539522 GNEQ9Y223 722 aaKnown RBP14.85□□□□□ -0.03
CCDC42-202ENST00000539522 MYH15Q9Y2K3 1946 aa14.85□□□□□ -0.03
CCDC42-202ENST00000539522 SPDYE3A6NKU9 549 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 EIF3JO75822 258 aaKnown RBP14.84□□□□□ -0.03
CCDC42-202ENST00000539522 SYT1P21579 422 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 U2AF2P26368 475 aaKnown RBP eCLIP14.84□□□□□ -0.03
CCDC42-202ENST00000539522 KRT2P35908 639 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 PDE4DQ08499 809 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 PKP1Q13835 747 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 STXBP2Q15833 593 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 INF2Q27J81 1249 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 FAM184AQ8NB25 1140 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 BICD2Q8TD16 824 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 TBCKQ8TEA7 893 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 ABHD8Q96I13 439 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 MBOAT7Q96N66 472 aa14.84□□□□□ -0.03
CCDC42-202ENST00000539522 CIZ1Q9ULV3 898 aaPredicted RBP14.84□□□□□ -0.03
CCDC42-202ENST00000539522 MYADML2A6NDP7 307 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 SEPT4O43236 478 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 ATP9AO75110 1047 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 TDP2O95551 362 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 ARP10275 920 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 CCND2P30279 289 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 CIITAP33076 1130 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 DDIT3P35638 169 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 TOB1P50616 345 aaPredicted RBP14.83□□□□□ -0.04
CCDC42-202ENST00000539522 PIK3AP1Q6ZUJ8 805 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 CRISPLD2Q9H0B8 497 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 HMX1Q9NP08 348 aaPredicted RBP14.83□□□□□ -0.04
CCDC42-202ENST00000539522 CHMP5Q9NZZ3 219 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 DDX41Q9UJV9 622 aaKnown RBP14.83□□□□□ -0.04
CCDC42-202ENST00000539522 MTMR6Q9Y217 621 aa14.83□□□□□ -0.04
CCDC42-202ENST00000539522 SPATA31C2B4DYI2 1134 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 MEIS1O00470 390 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 ADAMTS4O75173 837 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 XBP1P17861 261 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 ICAM3P32942 547 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 LY6KQ17RY6 165 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 LARP1BQ659C4 914 aaKnown RBP14.82□□□□□ -0.04
CCDC42-202ENST00000539522 SEPT14Q6ZU15 432 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 MXRA8Q9BRK3 442 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 FOXP1Q9H334 677 aaPredicted RBP14.82□□□□□ -0.04
CCDC42-202ENST00000539522 JADE2Q9NQC1 790 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 DDX20Q9UHI6 824 aaKnown RBP14.82□□□□□ -0.04
CCDC42-202ENST00000539522 CNPY2Q9Y2B0 182 aa14.82□□□□□ -0.04
CCDC42-202ENST00000539522 CYP3A7-CYP3A51PA0A087WV96 503 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 SLC37A4O43826 429 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 KCNA2P16389 499 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 CYP3A7P24462 503 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 NKX3-2P78367 333 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 ARHGAP1Q07960 439 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 ITGB3BPQ13352 177 aaPredicted RBP14.81□□□□□ -0.04
CCDC42-202ENST00000539522 NONOQ15233 471 aaKnown RBP eCLIP14.81□□□□□ -0.04
CCDC42-202ENST00000539522 CEP55Q53EZ4 464 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 CCSAPQ6IQ19 270 aaPredicted RBP14.81□□□□□ -0.04
CCDC42-202ENST00000539522 XRRA1Q6P2D8 792 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 KRT25Q7Z3Z0 450 aa14.81□□□□□ -0.04
CCDC42-202ENST00000539522 GJA10Q969M2 543 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms