RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SKAP1Q86WV1 359 aa25.72■■□□□ 1.71
SCARB1-206ENST00000539320 MYL10Q9BUA6 226 aa25.72■■□□□ 1.71
SCARB1-206ENST00000539320 MTIF3Q9H2K0 278 aaKnown RBP25.72■■□□□ 1.71
SCARB1-206ENST00000539320 DDX41Q9UJV9 622 aaKnown RBP25.72■■□□□ 1.71
SCARB1-206ENST00000539320 SH2B2O14492 632 aaPredicted RBP25.71■■□□□ 1.71
SCARB1-206ENST00000539320 CYP2C9P11712 490 aa25.71■■□□□ 1.71
SCARB1-206ENST00000539320 MYCLP12524 364 aaPredicted RBP25.71■■□□□ 1.71
SCARB1-206ENST00000539320 DNAJB2P25686 324 aa25.71■■□□□ 1.71
SCARB1-206ENST00000539320 KIF5BP33176 963 aa25.71■■□□□ 1.71
SCARB1-206ENST00000539320 PTPN11Q06124 597 aaPredicted RBP25.71■■□□□ 1.71
SCARB1-206ENST00000539320 TMEM87BQ96K49 555 aa25.71■■□□□ 1.71
SCARB1-206ENST00000539320 SPZ1Q9BXG8 430 aa25.71■■□□□ 1.71
SCARB1-206ENST00000539320 PGM5Q15124 567 aa25.7■■□□□ 1.7
SCARB1-206ENST00000539320 NFXL1Q6ZNB6 911 aa25.7■■□□□ 1.7
SCARB1-206ENST00000539320 IL31RAQ8NI17 732 aa25.7■■□□□ 1.7
SCARB1-206ENST00000539320 PPP1R13LQ8WUF5 828 aa25.7■■□□□ 1.7
SCARB1-206ENST00000539320 PIBF1Q8WXW3 757 aa25.7■■□□□ 1.7
SCARB1-206ENST00000539320 HERVK_113Q902F9 699 aa25.7■■□□□ 1.7
SCARB1-206ENST00000539320 EMID1Q96A84 441 aaPredicted RBP25.7■■□□□ 1.7
SCARB1-206ENST00000539320 CDX2Q99626 313 aaPredicted RBP25.7■■□□□ 1.7
SCARB1-206ENST00000539320 NECTIN1Q15223 517 aa25.69■■□□□ 1.7
SCARB1-206ENST00000539320 SCLYQ96I15 445 aa25.69■■□□□ 1.7
SCARB1-206ENST00000539320 CCDC69A6NI79 296 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 FGBP02675 491 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 CASTP20810 708 aaKnown RBP25.68■■□□□ 1.7
SCARB1-206ENST00000539320 CCND2P30279 289 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 CHMP4BP1P59074 171 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 COL9A3Q14050 684 aaPredicted RBP25.68■■□□□ 1.7
SCARB1-206ENST00000539320 VSIG10LQ86VR7 867 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 FCHSD1Q86WN1 690 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 TMTC2Q8N394 836 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 TIFAQ96CG3 184 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 RRP36Q96EU6 259 aaKnown RBP25.68■■□□□ 1.7
SCARB1-206ENST00000539320 LZTS2Q9BRK4 669 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 CDH23Q9H251 3354 aa25.68■■□□□ 1.7
SCARB1-206ENST00000539320 RGS20O76081 388 aa25.67■■□□□ 1.7
SCARB1-206ENST00000539320 LIFRP42702 1097 aa25.67■■□□□ 1.7
SCARB1-206ENST00000539320 GNAQP50148 359 aa25.67■■□□□ 1.7
SCARB1-206ENST00000539320 LAMC2Q13753 1193 aa25.67■■□□□ 1.7
SCARB1-206ENST00000539320 DGKDQ16760 1214 aa25.67■■□□□ 1.7
SCARB1-206ENST00000539320 RPUSD2Q8IZ73 545 aaKnown RBP25.67■■□□□ 1.7
SCARB1-206ENST00000539320 TANC1Q9C0D5 1861 aa25.67■■□□□ 1.7
SCARB1-206ENST00000539320 CXXC1Q9P0U4 656 aaPredicted RBP25.67■■□□□ 1.7
SCARB1-206ENST00000539320 SEC63Q9UGP8 760 aaKnown RBP25.67■■□□□ 1.7
SCARB1-206ENST00000539320 NOD1Q9Y239 953 aa25.67■■□□□ 1.7
SCARB1-206ENST00000539320 FRMPD4Q14CM0 1322 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 PFKMP08237 780 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 SMARCA1P28370 1054 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 RNF20Q5VTR2 975 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 KCNV1Q6PIU1 500 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 OTOP2Q7RTS6 562 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 DHX37Q8IY37 1157 aaKnown RBP25.66■■□□□ 1.7
SCARB1-206ENST00000539320 PPTC7Q8NI37 304 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 MYLIPQ8WY64 445 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 KAT2BQ92831 832 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 PBX4Q9BYU1 374 aa25.66■■□□□ 1.7
SCARB1-206ENST00000539320 GRXCR1A8MXD5 290 aa25.65■■□□□ 1.7
SCARB1-206ENST00000539320 PITPNM1O00562 1244 aa25.65■■□□□ 1.7
SCARB1-206ENST00000539320 PLEKHA8P1O95397 391 aa25.65■■□□□ 1.7
SCARB1-206ENST00000539320 CALM1P0DP23 149 aa25.65■■□□□ 1.7
SCARB1-206ENST00000539320 CALM2P0DP24 149 aa25.65■■□□□ 1.7
SCARB1-206ENST00000539320 CALM3P0DP25 149 aa25.65■■□□□ 1.7
SCARB1-206ENST00000539320 SESTD1Q86VW0 696 aa25.65■■□□□ 1.7
SCARB1-206ENST00000539320 RXRAP19793 462 aa25.64■■□□□ 1.7
SCARB1-206ENST00000539320 UBA1P22314 1058 aaKnown RBP25.64■■□□□ 1.7
SCARB1-206ENST00000539320 VWCEQ96DN2 955 aa25.64■■□□□ 1.7
SCARB1-206ENST00000539320 KATNAL1Q9BW62 490 aa25.64■■□□□ 1.7
SCARB1-206ENST00000539320 LRRC2Q9BYS8 371 aa25.64■■□□□ 1.7
SCARB1-206ENST00000539320 SLC12A7Q9Y666 1083 aa25.64■■□□□ 1.7
SCARB1-206ENST00000539320 MYO9BQ13459 2157 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 CDC45O75419 566 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 GGPS1O95749 300 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 F2P00734 622 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 ZNF286BP0CG31 522 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 HOXD8P13378 290 aaPredicted RBP25.63■■□□□ 1.69
SCARB1-206ENST00000539320 FOSL2P15408 326 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 RFC2P35250 354 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 PBX2P40425 430 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 PSEN2P49810 448 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 BFSP2Q13515 415 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 RAB30Q15771 203 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 PTGISQ16647 500 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 CELF3Q5SZQ8 465 aaKnown RBP25.63■■□□□ 1.69
SCARB1-206ENST00000539320 SRBD1Q8N5C6 995 aaKnown RBP25.63■■□□□ 1.69
SCARB1-206ENST00000539320 RETREG2Q8NC44 543 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 ZNF576Q9H609 170 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 SCN5AQ14524 2016 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 MYH7BA7E2Y1 1941 aa25.63■■□□□ 1.69
SCARB1-206ENST00000539320 TGFB3P10600 412 aa25.62■■□□□ 1.69
SCARB1-206ENST00000539320 GNPTABQ3T906 1256 aa25.62■■□□□ 1.69
SCARB1-206ENST00000539320 MYSM1Q5VVJ2 828 aa25.62■■□□□ 1.69
SCARB1-206ENST00000539320 GDF6Q6KF10 455 aaPredicted RBP25.62■■□□□ 1.69
SCARB1-206ENST00000539320 DEFB128Q7Z7B8 93 aa25.62■■□□□ 1.69
SCARB1-206ENST00000539320 RAB11FIP4Q86YS3 637 aa25.62■■□□□ 1.69
SCARB1-206ENST00000539320 CCDC155Q8N6L0 562 aa25.62■■□□□ 1.69
SCARB1-206ENST00000539320 MAFAQ8NHW3 353 aaPredicted RBP25.62■■□□□ 1.69
SCARB1-206ENST00000539320 CUL5Q93034 780 aa25.62■■□□□ 1.69
SCARB1-206ENST00000539320 ZFP91Q96JP5 570 aaPredicted RBP25.62■■□□□ 1.69
SCARB1-206ENST00000539320 SPATA33Q96N06 139 aa25.62■■□□□ 1.69
SCARB1-206ENST00000539320 ZBBXA8MT70 800 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms