RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 VAT1LQ9HCJ6 419 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 TCF20Q9UGU0 1960 aaKnown RBP14.58□□□□□ -0.08
VAMP1-206ENST00000538970 GBF1Q92538 1859 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 KLRF2D3W0D1 207 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 PPP1R11O60927 126 aaPredicted RBP14.57□□□□□ -0.08
VAMP1-206ENST00000538970 BMP1P13497 986 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 ATP2A2P16615 1042 aaKnown RBP14.57□□□□□ -0.08
VAMP1-206ENST00000538970 IGFBP4P22692 258 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 HSD17B4P51659 736 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 TFF2Q03403 129 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 ARHGEF16Q5VV41 709 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 DEFB128Q7Z7B8 93 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 IL27Q8NEV9 243 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 MTMR8Q96EF0 704 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 PXMP2Q9NR77 195 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 MAD2L2Q9UI95 211 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 PCDHA11Q9Y5I1 949 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 CHD7Q9P2D1 2997 aa14.57□□□□□ -0.08
VAMP1-206ENST00000538970 PALM3A6NDB9 673 aaPredicted RBP14.56□□□□□ -0.08
VAMP1-206ENST00000538970 ZBTB5O15062 677 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 EIF3JO75822 258 aaKnown RBP14.56□□□□□ -0.08
VAMP1-206ENST00000538970 CFBP00751 764 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 CYP21A2P08686 494 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 IQCF3P0C7M6 154 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 MYOGP15173 224 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 PPP2R2DQ66LE6 453 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 CHST3Q7LGC8 479 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 SESTD1Q86VW0 696 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 KAT2BQ92831 832 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 EMID1Q96A84 441 aaPredicted RBP14.56□□□□□ -0.08
VAMP1-206ENST00000538970 CTAGE1Q96RT6 745 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 DDX41Q9UJV9 622 aaKnown RBP14.56□□□□□ -0.08
VAMP1-206ENST00000538970 NOD1Q9Y239 953 aa14.56□□□□□ -0.08
VAMP1-206ENST00000538970 NR3C2P08235 984 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 ACTN1P12814 892 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 KCNQ1P51787 676 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 CHMP4BP1P59074 171 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 TRDNQ13061 729 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 BFSP2Q13515 415 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 GRM4Q14833 912 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 PTGISQ16647 500 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 SLC35G1Q2M3R5 365 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 RETREG2Q8NC44 543 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 HCN4Q9Y3Q4 1203 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 PCDHA1Q9Y5I3 950 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 MRVI1Q9Y6F6 885 aa14.55□□□□□ -0.08
VAMP1-206ENST00000538970 SCN5AQ14524 2016 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 RGS20O76081 388 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 CASTP20810 708 aaKnown RBP14.54□□□□□ -0.08
VAMP1-206ENST00000538970 CHMLP26374 656 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 PTH1RQ03431 593 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 DGKDQ16760 1214 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 GDF6Q6KF10 455 aaPredicted RBP14.54□□□□□ -0.08
VAMP1-206ENST00000538970 CCDC155Q8N6L0 562 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 CAGE1Q8TC20 777 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 RUFY2Q8WXA3 655 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 SLC9A7Q96T83 725 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 PDCD2LQ9BRP1 358 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 MAP3K20Q9NYL2 800 aaKnown RBP14.54□□□□□ -0.08
VAMP1-206ENST00000538970 ARIH1Q9Y4X5 557 aaPredicted RBP14.54□□□□□ -0.08
VAMP1-206ENST00000538970 SUPT16HQ9Y5B9 1047 aaKnown RBP14.54□□□□□ -0.08
VAMP1-206ENST00000538970 TAF6LQ9Y6J9 622 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
VAMP1-206ENST00000538970 KIAA1217Q5T5P2 1943 aa14.54□□□□□ -0.08
VAMP1-206ENST00000538970 F2P00734 622 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 CA3P07451 260 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 HOXA13P31271 388 aaPredicted RBP14.53□□□□□ -0.08
VAMP1-206ENST00000538970 RBL2Q08999 1139 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 LAMC2Q13753 1193 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 STOX1Q6ZVD7 989 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 ALYREFQ86V81 257 aaKnown RBP14.53□□□□□ -0.08
VAMP1-206ENST00000538970 HOMER1Q86YM7 354 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 SAMD3Q8N6K7 520 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 PPTC7Q8NI37 304 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 AFAP1L1Q8TED9 768 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 DHX38Q92620 1227 aaKnown RBP14.53□□□□□ -0.08
VAMP1-206ENST00000538970 KHSRPQ92945 711 aaKnown RBP eCLIP14.53□□□□□ -0.08
VAMP1-206ENST00000538970 PIGSQ96S52 555 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 RIOX1Q9H6W3 641 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 SENP2Q9HC62 589 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 GTF2IRD1Q9UHL9 959 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 MYH6P13533 1939 aa14.53□□□□□ -0.08
VAMP1-206ENST00000538970 E7EWF7 191 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 IFIT3O14879 490 aaKnown RBP14.52□□□□□ -0.09
VAMP1-206ENST00000538970 SGSM2O43147 1006 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 CYTH3O43739 400 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 BAIAP3O94812 1187 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 ZNF286BP0CG31 522 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 HOXD8P13378 290 aaPredicted RBP14.52□□□□□ -0.09
VAMP1-206ENST00000538970 PSEN2P49810 448 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 TROAPQ12815 778 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 PGM5Q15124 567 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 TMEM67Q5HYA8 995 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 RALYLQ86SE5 291 aaKnown RBP14.52□□□□□ -0.09
VAMP1-206ENST00000538970 DHX37Q8IY37 1157 aaKnown RBP14.52□□□□□ -0.09
VAMP1-206ENST00000538970 MICALL1Q8N3F8 863 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 C7orf31Q8N865 590 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 IL31RAQ8NI17 732 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 PHOSPHO2Q8TCD6 241 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 KATNAL1Q9BW62 490 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms