RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 CAP2P40123 477 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 LONRF2Q1L5Z9 754 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 PRRT3Q5FWE3 981 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 TMEM67Q5HYA8 995 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 ZC3H12BQ5HYM0 836 aaKnown RBP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 TDRD10Q5VZ19 366 aaKnown RBP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 ANKRD34AQ69YU3 496 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 HEATR6Q6AI08 1181 aaKnown RBP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 TMEM192Q8IY95 271 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 SMYD4Q8IYR2 804 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 BAHD1Q8TBE0 780 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 CYB5D2Q8WUJ1 264 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 SMARCC1Q92922 1105 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 SGSM3Q96HU1 749 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 APBA2Q99767 749 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 FOXQ1Q9C009 403 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 LRP2BPQ9P2M1 347 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 COL4A3BPQ9Y5P4 624 aa5.41□□□□□ -1.54
SNHG1-203ENST00000537024 RBBP6Q7Z6E9 1792 aaKnown RBP5.41□□□□□ -1.54
SNHG1-203ENST00000537024 FAM229AH3BQW9 127 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 UBOX5O94941 541 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 TIAF1O95411 115 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 SLBPQ14493 270 aaKnown RBP eCLIP5.4□□□□□ -1.542e-8■□□□□ 9.6
SNHG1-203ENST00000537024 TKFCQ3LXA3 575 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 UBE3DQ7Z6J8 389 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 CCDC144CPQ8IYA2 1237 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 CNTROBQ8N137 903 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 ZBTB38Q8NAP3 1195 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-203ENST00000537024 KCNH5Q8NCM2 988 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 LINC00116Q8NCU8 138 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 XAGE3Q8WTP9 111 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 PPP1R14AQ96A00 147 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 IPO9Q96P70 1041 aaKnown RBP5.4□□□□□ -1.54
SNHG1-203ENST00000537024 CDK19Q9BWU1 502 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 DDX21Q9NR30 783 aaKnown RBP eCLIP5.4□□□□□ -1.541e-323■■■□□ 15.6
SNHG1-203ENST00000537024 PCOLCE2Q9UKZ9 415 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 ACTL7BQ9Y614 415 aa5.4□□□□□ -1.54
SNHG1-203ENST00000537024 INSRP06213 1382 aa5.4□□□□□ -1.55
SNHG1-203ENST00000537024 SART1O43290 800 aaKnown RBP5.39□□□□□ -1.55
SNHG1-203ENST00000537024 LRIG2O94898 1065 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 EPHX1P07099 455 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 GYS1P13807 737 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 TMF1P82094 1093 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 CIAPIN1Q6FI81 312 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 CTU1Q7Z7A3 348 aaKnown RBP5.39□□□□□ -1.55
SNHG1-203ENST00000537024 PPFIBP1Q86W92 1011 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 AGGF1Q8N302 714 aaeCLIP5.39□□□□□ -1.55
SNHG1-203ENST00000537024 MFSD2AQ8NA29 543 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 C2CD4AQ8NCU7 369 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-203ENST00000537024 CDC6Q99741 560 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 HAUS7Q99871 368 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 MKRN2Q9H000 416 aaKnown RBP5.39□□□□□ -1.55
SNHG1-203ENST00000537024 GSX1Q9H4S2 264 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-203ENST00000537024 PCDH12Q9NPG4 1184 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 FAM105AQ9NUU6 356 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 NOP53Q9NZM5 478 aaKnown RBP5.39□□□□□ -1.55
SNHG1-203ENST00000537024 PLAAQ9Y263 795 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 COL5A3P25940 1745 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-203ENST00000537024 CACNA1AO00555 2505 aa5.39□□□□□ -1.55
SNHG1-203ENST00000537024 RANBP2P49792 3224 aaKnown RBP5.38□□□□□ -1.55
SNHG1-203ENST00000537024 CEP290O15078 2479 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 NRXN2Q9P2S2 1712 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 CCDC163A0A0D9SF12 145 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-203ENST00000537024 C9IYK1 514 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 F8W735 103 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-203ENST00000537024 GAS2O43903 313 aaKnown RBP5.38□□□□□ -1.55
SNHG1-203ENST00000537024 ADCY3O60266 1144 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 RAB6AP20340 208 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 PLA2G5P39877 138 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 USP11P51784 963 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 HSP90AA2PQ14568 343 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-203ENST00000537024 ARMCX6Q7L4S7 300 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 ADAT2Q7Z6V5 191 aaKnown RBP5.38□□□□□ -1.55
SNHG1-203ENST00000537024 TMEM130Q8N3G9 435 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 ZNF512BQ96KM6 892 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-203ENST00000537024 GBP3Q9H0R5 595 aa5.38□□□□□ -1.55
SNHG1-203ENST00000537024 RGPD2P0DJD1 1756 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 PAPPA2Q9BXP8 1791 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 AFDNP55196 1824 aaKnown RBP5.37□□□□□ -1.55
SNHG1-203ENST00000537024 VCANP13611 3396 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 TRAV20A0A0B4J274 112 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 A0A1W2PQU0 124 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 PPM1BO75688 479 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 MASP1P48740 699 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 RNF4P78317 190 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 DDR1Q08345 913 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 AXDND1Q5T1B0 1012 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-203ENST00000537024 DCAF15Q66K64 600 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 LRRN4CLQ8ND94 238 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 FGD4Q96M96 766 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 AARSD1Q9BTE6 412 aaKnown RBP5.37□□□□□ -1.55
SNHG1-203ENST00000537024 YIPF2Q9BWQ6 316 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 CEP41Q9BYV8 373 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 KLHL25Q9H0H3 589 aa5.37□□□□□ -1.55
SNHG1-203ENST00000537024 AKTIPQ9H8T0 292 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms