RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 USP17L21D6R901 530 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 BIN1O00499 593 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 TADA3O75528 432 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 ZRANB2O95218 330 aaKnown RBP eCLIP13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 C12orf60Q5U649 245 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 RESP18Q5W5W9 173 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 SUGP1Q8IWZ8 645 aaKnown RBP13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 MLKLQ8NB16 471 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 ALG1Q9BT22 464 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 PUS7LQ9H0K6 701 aaKnown RBP13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 ZNF446Q9NWS9 450 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 SWAP70Q9UH65 585 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 SLC4A4Q9Y6R1 1079 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 STK36Q9NRP7 1315 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 ATP2B1P20020 1258 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 RGS2P41220 211 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 CDK8P49336 464 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 METAP2P50579 478 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 CACNB2Q08289 660 aaPredicted RBP13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 WDR78Q5VTH9 848 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 LBX2Q6XYB7 198 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 TMEM179Q6ZVK1 233 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 OSBP2Q969R2 916 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 NAA15Q9BXJ9 866 aaKnown RBP13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 PSD3Q9NYI0 1048 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 NR2E3Q9Y5X4 410 aa13.04□□□□□ -0.32
CHRNB1-202ENST00000536404 EVI5O60447 810 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 FGAP02671 866 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 TUBBP07437 444 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 PTPREP23469 700 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 CCND3P30281 292 aaPredicted RBP13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 CCNA1P78396 465 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 NECAB2Q7Z6G3 386 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 REXO1L1PQ8IX06 675 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 BAG1Q99933 345 aaPredicted RBP13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 FLRT1Q9NZU1 646 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 PPP2R2CQ9Y2T4 447 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 MYH7P12883 1935 aa13.03□□□□□ -0.32
CHRNB1-202ENST00000536404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 SLC15A5A6NIM6 579 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 MAGEA9P43362 315 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 COG2Q14746 738 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 C16orf86Q6ZW13 317 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 CHST3Q7LGC8 479 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 SRLQ86TD4 932 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 ENOX1Q8TC92 643 aaKnown RBP13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 GOLGA1Q92805 767 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 APBA2Q99767 749 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 ARFGAP3Q9NP61 516 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 OGDHLQ9ULD0 1010 aa13.02□□□□□ -0.32
CHRNB1-202ENST00000536404 RANBP2P49792 3224 aaKnown RBP13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 ALPK3Q96L96 1907 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 ICA1Q05084 483 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 TBX2Q13207 712 aaPredicted RBP13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 BRD3Q15059 726 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 PTPAQ15257 358 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 SPECC1LQ69YQ0 1117 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 KRT40Q6A162 431 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 SPICE1Q8N0Z3 855 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 STRBPQ96SI9 672 aaKnown RBP13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 MOV10L1Q9BXT6 1211 aaKnown RBP13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 KCNH3Q9ULD8 1083 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 TMX2Q9Y320 296 aa13.02□□□□□ -0.33
CHRNB1-202ENST00000536404 A0A087WWV3 80 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 KIF28PB7ZC32 967 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 DSG3P32926 999 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 PLA2G4AP47712 749 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 TDO2P48775 406 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 ZSCAN26Q16670 478 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 LHX8Q68G74 356 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 SHC4Q6S5L8 630 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 C10orf67Q8IYJ2 551 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 STK11IPQ8N1F8 1099 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 MSL3Q8N5Y2 521 aaKnown RBP13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 NPLOC4Q8TAT6 608 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 CEP89Q96ST8 783 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
CHRNB1-202ENST00000536404 CARD6Q9BX69 1037 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms