RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 BEND3Q5T5X7 828 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 SPECC1LQ69YQ0 1117 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 MCM10Q7L590 875 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 GET4Q7L5D6 327 aaPredicted RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 N4BP2Q86UW6 1770 aaPredicted RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 TRIM50Q86XT4 487 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 SMYD4Q8IYR2 804 aaPredicted RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 CCDC63Q8NA47 563 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 UHMK1Q8TAS1 419 aaKnown RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 USP33Q8TEY7 942 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 ZSCAN31Q96LW9 406 aaPredicted RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 MTA3Q9BTC8 594 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 REPIN1Q9BWE0 567 aaKnown RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 RANBP17Q9H2T7 1088 aaKnown RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 TUT1Q9H6E5 874 aaKnown RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 SEC31BQ9NQW1 1179 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 ABCF3Q9NUQ8 709 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 SPATA7Q9P0W8 599 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 CFAP45Q9UL16 551 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 ZNF510Q9Y2H8 683 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 NFE2L3Q9Y4A8 694 aa4.12□□□□□ -1.75
MCF2-210ENST00000536274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.12□□□□□ -1.75
MCF2-210ENST00000536274 FER1L6Q2WGJ9 1857 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 NUTM2FA1L443 756 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 MACROD2A1Z1Q3 448 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 TMEM110-MUSTN1A8MSY1 372 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ALOX15P16050 662 aaPredicted RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 FECHP22830 423 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 PCK1P35558 622 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 CARSP49589 748 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 SKOR1P84550 965 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 XRCC4Q13426 336 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 STK38Q15208 465 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 IMMTQ16891 758 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 EAPPQ56P03 285 aaPredicted RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 C6orf132Q5T0Z8 1188 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 BLOC1S2Q6QNY1 142 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ISLR2Q6UXK2 745 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 CCDC129Q6ZRS4 1044 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 MAATS1Q7Z4T9 603 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 AENQ8WTP8 325 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 EEF2KMTQ96G04 330 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 DNAJC1Q96KC8 554 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 NDNQ99608 321 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ADAM33Q9BZ11 813 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 JADE2Q9NQC1 790 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 IGSF5Q9NSI5 407 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ETNK2Q9NVF9 386 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 NOP53Q9NZM5 478 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 NFU1Q9UMS0 254 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 TDRKHQ9Y2W6 561 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 A0A1W2PQ67 120 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 LRRD1A4D1F6 860 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 MAGEA13PA6NCF6 341 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 RCCD1A6NED2 376 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 AKR1B15C9JRZ8 316 aaPredicted RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 BHMG1C9JSJ3 638 aaPredicted RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 GOLGA8KD6RF30 607 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 CREB3O43889 395 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 OPA1O60313 960 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 PFDN1O60925 122 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 HSF2BPO75031 334 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 CTDNEP1O95476 244 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 FAM107AO95990 144 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 KRT16P08779 473 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 SCG2P13521 617 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 PDCP20941 246 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 GJA8P48165 433 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 USP11P51784 963 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 SESN3P58005 492 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 NECTIN1Q15223 517 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 HDGFL1Q5TGJ6 251 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 OLFML2BQ68BL8 750 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 C16orf87Q6PH81 154 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 THSD4Q6ZMP0 1018 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ZNF589Q86UQ0 364 aaPredicted RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 MSL3Q8N5Y2 521 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 DYDC1Q8WWB3 177 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 MAIP1Q8WWC4 291 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 SLC35B4Q969S0 331 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 NAF1Q96HR8 494 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 DHRS1Q96LJ7 313 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 NDST4Q9H3R1 872 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 PCDHGA10Q9Y5H3 936 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 EP400Q96L91 3159 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 MYH8P13535 1937 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 RASSF10A6NK89 507 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 SMIM23A6NLE4 172 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 BOLA2-SMG1P6H3BVE0 249 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 NCK2O43639 380 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 GNA14O95837 355 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ALDH3A1P30838 453 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 NMIQ13287 307 aaPredicted RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 DIXDC1Q155Q3 683 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 PTPROQ16827 1216 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 WHAMMP3Q1A5X7 153 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ZMYM1Q5SVZ6 1142 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 SLC9C2Q5TAH2 1124 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 DUS1LQ6P1R4 473 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 CPLX4Q7Z7G2 160 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms