RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 THBS2P35442 1172 aa7.74□□□□□ -1.17
VBP1-203ENST00000535916 C6orf15Q6UXA7 325 aaPredicted RBP7.74□□□□□ -1.17
VBP1-203ENST00000535916 STK32CQ86UX6 486 aa7.74□□□□□ -1.17
VBP1-203ENST00000535916 CCDC103Q8IW40 242 aa7.74□□□□□ -1.17
VBP1-203ENST00000535916 SEC14L1Q92503 715 aa7.74□□□□□ -1.17
VBP1-203ENST00000535916 PALD1Q9ULE6 856 aa7.74□□□□□ -1.17
VBP1-203ENST00000535916 MRVI1Q9Y6F6 885 aa7.74□□□□□ -1.17
VBP1-203ENST00000535916 B2RBV5 119 aa7.73□□□□□ -1.17
VBP1-203ENST00000535916 RPL11P62913 178 aaKnown RBP7.73□□□□□ -1.17
VBP1-203ENST00000535916 CD300LDQ6UXZ3 194 aa7.73□□□□□ -1.17
VBP1-203ENST00000535916 NLRP10Q86W26 655 aa7.73□□□□□ -1.17
VBP1-203ENST00000535916 BORCS6Q96GS4 357 aa7.73□□□□□ -1.17
VBP1-203ENST00000535916 CNOT11Q9UKZ1 510 aaKnown RBP7.73□□□□□ -1.17
VBP1-203ENST00000535916 TIMM13Q9Y5L4 95 aaPredicted RBP7.73□□□□□ -1.17
VBP1-203ENST00000535916 ITGAVP06756 1048 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 BCL6P41182 706 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 STAT5AP42229 794 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 SLC6A11P48066 632 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 LARP1BQ659C4 914 aaKnown RBP7.72□□□□□ -1.17
VBP1-203ENST00000535916 IQCEQ6IPM2 695 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 CEP68Q76N32 757 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 ZNF227Q86WZ6 799 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 KYQ8NBH2 561 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 DIO2Q92813 273 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 FBXL7Q9UJT9 491 aa7.72□□□□□ -1.17
VBP1-203ENST00000535916 SNRPB2P08579 225 aaKnown RBP7.71□□□□□ -1.18
VBP1-203ENST00000535916 RPL13P26373 211 aaKnown RBP7.71□□□□□ -1.18
VBP1-203ENST00000535916 ECI1P42126 302 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 ITGA1P56199 1179 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 ZNF827Q17R98 1081 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 SV2CQ496J9 727 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 MROH9Q5TGP6 573 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 E4F1Q66K89 784 aaPredicted RBP7.71□□□□□ -1.18
VBP1-203ENST00000535916 MILR1Q7Z6M3 343 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 RIOX2Q8IUF8 465 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 FAM178BQ8IXR5 827 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 FAM126BQ8IXS8 530 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 Q8N1Y9 231 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 PCDH18Q9HCL0 1135 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 ACTR10Q9NZ32 417 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 X6R8D5 127 aa7.71□□□□□ -1.18
VBP1-203ENST00000535916 ITGB3P05106 788 aa7.7□□□□□ -1.18
VBP1-203ENST00000535916 SF1Q15637 639 aaKnown RBP7.7□□□□□ -1.18
VBP1-203ENST00000535916 PRSS53Q2L4Q9 553 aa7.7□□□□□ -1.18
VBP1-203ENST00000535916 ZXDCQ2QGD7 858 aaPredicted RBP7.7□□□□□ -1.18
VBP1-203ENST00000535916 RGL3Q3MIN7 710 aa7.7□□□□□ -1.18
VBP1-203ENST00000535916 ZC3H18Q86VM9 953 aaKnown RBP7.7□□□□□ -1.18
VBP1-203ENST00000535916 KREMEN2Q8NCW0 462 aa7.7□□□□□ -1.18
VBP1-203ENST00000535916 TRMT2BQ96GJ1 504 aaKnown RBP7.7□□□□□ -1.18
VBP1-203ENST00000535916 LRP2BPQ9P2M1 347 aa7.7□□□□□ -1.18
VBP1-203ENST00000535916 MEFVO15553 781 aaPredicted RBP7.69□□□□□ -1.18
VBP1-203ENST00000535916 SUSD5O60279 629 aa7.69□□□□□ -1.18
VBP1-203ENST00000535916 INSRRP14616 1297 aa7.69□□□□□ -1.18
VBP1-203ENST00000535916 HOXC12P31275 282 aa7.69□□□□□ -1.18
VBP1-203ENST00000535916 KCNAB2Q13303 367 aa7.69□□□□□ -1.18
VBP1-203ENST00000535916 TTLL6Q8N841 843 aa7.69□□□□□ -1.18
VBP1-203ENST00000535916 RBM15Q96T37 977 aaKnown RBP eCLIP7.69□□□□□ -1.18
VBP1-203ENST00000535916 CAPN10Q9HC96 672 aa7.69□□□□□ -1.18
VBP1-203ENST00000535916 SCG5P05408 212 aa7.68□□□□□ -1.18
VBP1-203ENST00000535916 SSBP05455 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
VBP1-203ENST00000535916 MAGEA10P43363 369 aaPredicted RBP7.68□□□□□ -1.18
VBP1-203ENST00000535916 GTF2A2P52657 109 aa7.68□□□□□ -1.18
VBP1-203ENST00000535916 TNNI3KQ59H18 835 aa7.68□□□□□ -1.18
VBP1-203ENST00000535916 PRR31Q5SQ13 230 aa7.68□□□□□ -1.18
VBP1-203ENST00000535916 MCTP2Q6DN12 878 aa7.68□□□□□ -1.18
VBP1-203ENST00000535916 MRM1Q6IN84 353 aaKnown RBP7.68□□□□□ -1.18
VBP1-203ENST00000535916 RCBTB1Q8NDN9 531 aa7.68□□□□□ -1.18
VBP1-203ENST00000535916 TMEM169Q96HH4 297 aa7.68□□□□□ -1.18
VBP1-203ENST00000535916 GPR20Q99678 358 aa7.68□□□□□ -1.18
VBP1-203ENST00000535916 MYO1BO43795 1136 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 LCP1P13796 627 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 KCNJ6P48051 423 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 KRTAP1-1Q07627 177 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 PUM1Q14671 1186 aaKnown RBP eCLIP7.67□□□□□ -1.18
VBP1-203ENST00000535916 CR1LQ2VPA4 569 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 FAM26FQ5R3K3 315 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 ACBD5Q5T8D3 534 aaPredicted RBP7.67□□□□□ -1.18
VBP1-203ENST00000535916 PPIL6Q8IXY8 311 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 MICAL1Q8TDZ2 1067 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 SMPD4Q9NXE4 827 aa7.67□□□□□ -1.18
VBP1-203ENST00000535916 MROH6A6NGR9 719 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 DDX3XO00571 662 aaKnown RBP eCLIP7.66□□□□□ -1.189e-19■■□□□ 13.7
VBP1-203ENST00000535916 DDAH1O94760 285 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 ADAM17P78536 824 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 ADAM9Q13443 819 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 TBC1D10BQ4KMP7 808 aaPredicted RBP7.66□□□□□ -1.18
VBP1-203ENST00000535916 DENND5AQ6IQ26 1287 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 YIPF4Q9BSR8 244 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 PRKAG3Q9UGI9 489 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 INVSQ9Y283 1065 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 ZNF652Q9Y2D9 606 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 COA3Q9Y2R0 106 aaPredicted RBP7.66□□□□□ -1.18
VBP1-203ENST00000535916 PCDHA2Q9Y5H9 948 aa7.66□□□□□ -1.18
VBP1-203ENST00000535916 CPP00450 1065 aa7.65□□□□□ -1.18
VBP1-203ENST00000535916 PLATP00750 562 aa7.65□□□□□ -1.18
VBP1-203ENST00000535916 LTBRP36941 435 aa7.65□□□□□ -1.18
VBP1-203ENST00000535916 ETFBP38117 255 aa7.65□□□□□ -1.18
VBP1-203ENST00000535916 GFRA1P56159 465 aa7.65□□□□□ -1.18
VBP1-203ENST00000535916 TESK1Q15569 626 aa7.65□□□□□ -1.18
VBP1-203ENST00000535916 TXNDC5Q8NBS9 432 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms