RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 IL6STP40189 918 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-232ENST00000535094 FUT2Q10981 343 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-232ENST00000535094 MTMR8Q96EF0 704 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 PIGSQ96S52 555 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 GUCY2CP25092 1073 aa17.52■□□□□ 0.4
MCF2L-232ENST00000535094 AARSP49588 968 aaKnown RBP eCLIP17.52■□□□□ 0.4
MCF2L-232ENST00000535094 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.4
MCF2L-232ENST00000535094 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.52■□□□□ 0.4
MCF2L-232ENST00000535094 G3V3G9 751 aa17.52■□□□□ 0.4
MCF2L-232ENST00000535094 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-232ENST00000535094 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.4
MCF2L-232ENST00000535094 SLC4A9Q96Q91 983 aa17.52■□□□□ 0.4
MCF2L-232ENST00000535094 RIOK1Q9BRS2 568 aaKnown RBP17.52■□□□□ 0.4
MCF2L-232ENST00000535094 ASIC2Q16515 512 aa17.52■□□□□ 0.39
MCF2L-232ENST00000535094 KRT25Q7Z3Z0 450 aa17.52■□□□□ 0.39
MCF2L-232ENST00000535094 FAM84BQ96KN1 310 aaPredicted RBP17.52■□□□□ 0.39
MCF2L-232ENST00000535094 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 MYH10P35580 1976 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 MYOCDQ8IZQ8 938 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 ZNF507Q8TCN5 953 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 BRIP1Q9BX63 1249 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 TMEM110-MUSTN1A8MSY1 372 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 BAG3O95817 575 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 ABCB4P21439 1286 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 TMOD1P28289 359 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 HAUS3Q68CZ6 603 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 LRRC47Q8N1G4 583 aaKnown RBP17.51■□□□□ 0.39
MCF2L-232ENST00000535094 GLIS3Q8NEA6 775 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 NLRP3Q96P20 1036 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 LSP1P33241 339 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 RCAN1P53805 252 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 ALS2CLQ60I27 953 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 DAAM2Q86T65 1068 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 KSR1Q8IVT5 923 aa17.51■□□□□ 0.39
MCF2L-232ENST00000535094 DDX47Q9H0S4 455 aaKnown RBP17.51■□□□□ 0.39
MCF2L-232ENST00000535094 ARPP21Q9UBL0 812 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-232ENST00000535094 KRT13P13646 458 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 NF2P35240 595 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 NPY5RQ15761 445 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 TTMPQ5BVD1 217 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 DYDC1Q8WWB3 177 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 DDX12PQ92771 950 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 SEMA6BQ9H3T3 888 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 KRIT1O00522 736 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 KCNB1Q14721 858 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 PARP10Q53GL7 1025 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 CD248Q9HCU0 757 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 NOVA2Q9UNW9 492 aaKnown RBP17.5■□□□□ 0.39
MCF2L-232ENST00000535094 TNS3Q68CZ2 1445 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 MYMKA6NI61 221 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 RPS8P62241 208 aaKnown RBP17.5■□□□□ 0.39
MCF2L-232ENST00000535094 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
MCF2L-232ENST00000535094 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-232ENST00000535094 CCDC25Q86WR0 208 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 ARFGAP2Q8N6H7 521 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 EYA3Q99504 573 aa17.5■□□□□ 0.39
MCF2L-232ENST00000535094 TDP2O95551 362 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 KLRC1P26715 233 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 UBE2SQ16763 222 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 PEX26Q7Z412 305 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-232ENST00000535094 AENQ8WTP8 325 aaKnown RBP17.49■□□□□ 0.39
MCF2L-232ENST00000535094 KAT2BQ92831 832 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 MINPP1Q9UNW1 487 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 PLAGL2Q9UPG8 496 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 RPSAP08865 295 aaKnown RBP17.49■□□□□ 0.39
MCF2L-232ENST00000535094 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 TBC1D31Q96DN5 1066 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 TMEM47Q9BQJ4 181 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 PACSIN1Q9BY11 444 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 BAIAP2L1Q9UHR4 511 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 FAM26FQ5R3K3 315 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 ZNF34Q8IZ26 560 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 CCT8L2Q96SF2 557 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 ATP8A2Q9NTI2 1148 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 SLAIN2Q9P270 581 aa17.49■□□□□ 0.39
MCF2L-232ENST00000535094 C5P01031 1676 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 KLRC4O43908 158 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 BRINP3Q76B58 766 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 MMGT1Q8N4V1 131 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 SH3RF3Q8TEJ3 882 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-232ENST00000535094 NSUN4Q96CB9 384 aaKnown RBP17.48■□□□□ 0.39
MCF2L-232ENST00000535094 KBTBD4Q9NVX7 518 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 SALL4Q9UJQ4 1053 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 VPS36Q86VN1 386 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 MTA3Q9BTC8 594 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 PANK4Q9NVE7 773 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 ATP8A1Q9Y2Q0 1164 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 ERVV-1B6SEH8 477 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 RPS6KA5O75582 802 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 IFNAR2P48551 515 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 DDB1Q16531 1140 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 TEX11Q8IYF3 940 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 TLR10Q9BXR5 811 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 CCSER1Q9C0I3 900 aa17.48■□□□□ 0.39
MCF2L-232ENST00000535094 BUB1BO60566 1050 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-232ENST00000535094 VIMP08670 466 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms