RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 FAM208BQ5VWN6 2430 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 TBX10O75333 385 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 GJB5O95377 273 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 LMNAP02545 664 aaKnown RBP12.3□□□□□ -0.44
TNC-209ENST00000534839 SMCPP49901 116 aaPredicted RBP12.3□□□□□ -0.44
TNC-209ENST00000534839 RAB15P59190 212 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 PSMC6P62333 389 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 COL9A3Q14050 684 aaPredicted RBP12.3□□□□□ -0.44
TNC-209ENST00000534839 KIAA0319Q5VV43 1072 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 METTL16Q86W50 562 aaKnown RBP12.3□□□□□ -0.44
TNC-209ENST00000534839 CRIPAKQ8N1N5 446 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 ZNF384Q8TF68 577 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 CHMP4AQ9BY43 222 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 ZFAND3Q9H8U3 227 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 HOXC10Q9NYD6 342 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 ASPMQ8IZT6 3477 aa12.3□□□□□ -0.44
TNC-209ENST00000534839 SOBPA7XYQ1 873 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 ESPNB1AK53 854 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 AXIN1O15169 862 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 CABYRO75952 493 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 ADRB1P08588 477 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 IQCF3P0C7M6 154 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 TIMP2P16035 220 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
TNC-209ENST00000534839 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
TNC-209ENST00000534839 NKX3-2P78367 333 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 CCDC144BQ3MJ40 725 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 DCLK2Q8N568 766 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 ITPKCQ96DU7 683 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 KAZALD1Q96I82 304 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 ALDH8A1Q9H2A2 487 aaPredicted RBP12.29□□□□□ -0.44
TNC-209ENST00000534839 TRMT13Q9NUP7 481 aaKnown RBP12.29□□□□□ -0.44
TNC-209ENST00000534839 ABCF2Q9UG63 623 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 CD207Q9UJ71 328 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 CDV3Q9UKY7 258 aaKnown RBP12.29□□□□□ -0.44
TNC-209ENST00000534839 DENND2AQ9ULE3 1009 aa12.29□□□□□ -0.44
TNC-209ENST00000534839 GRM8O00222 908 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 NCK2O43639 380 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 RAD21O60216 631 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 HYAL1Q12794 435 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 FKBP5Q13451 457 aaPredicted RBP12.28□□□□□ -0.44
TNC-209ENST00000534839 ACVR2BQ13705 512 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 PTPN21Q16825 1174 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 BEND3Q5T5X7 828 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
TNC-209ENST00000534839 CRACR2BQ8N4Y2 399 aaPredicted RBP12.28□□□□□ -0.44
TNC-209ENST00000534839 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
TNC-209ENST00000534839 LPIN2Q92539 896 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 SUCLG2Q96I99 432 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 CRBNQ96SW2 442 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 SEZ6LQ9BYH1 1024 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 SIL1Q9H173 461 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 ASTN1O14525 1302 aa12.28□□□□□ -0.44
TNC-209ENST00000534839 LINC01565O15544 149 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 ICAM3P32942 547 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 MECOMQ03112 1051 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 GPM6BQ13491 265 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 EPC2Q52LR7 807 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 PPP1R26Q5T8A7 1209 aaPredicted RBP12.27□□□□□ -0.45
TNC-209ENST00000534839 FAM117BQ6P1L5 589 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 TEX11Q8IYF3 940 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 CCDC116Q8IYX3 515 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 MSL3Q8N5Y2 521 aaKnown RBP12.27□□□□□ -0.45
TNC-209ENST00000534839 MB21D1Q8N884 522 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 ATG4CQ96DT6 458 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 HINFPQ9BQA5 517 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 DHX36Q9H2U1 1008 aaKnown RBP12.27□□□□□ -0.45
TNC-209ENST00000534839 IFT57Q9NWB7 429 aa12.27□□□□□ -0.45
TNC-209ENST00000534839 FRYLO94915 3013 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 EP300Q09472 2414 aaPredicted RBP12.26□□□□□ -0.45
TNC-209ENST00000534839 POM121CA8CG34 1229 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 H3BNC9 293 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 CAPN5O15484 640 aaPredicted RBP12.26□□□□□ -0.45
TNC-209ENST00000534839 MAP4K4O95819 1239 aaPredicted RBP12.26□□□□□ -0.45
TNC-209ENST00000534839 SLC25A27O95847 323 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 GTF2F1P35269 517 aaKnown RBP eCLIP12.26□□□□□ -0.45
TNC-209ENST00000534839 PHKA1P46020 1223 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 TMEM132BQ14DG7 1078 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 RAB3GAP1Q15042 981 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 MAMDC4Q6UXC1 1216 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 TANGO6Q9C0B7 1094 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 TMPRSS4Q9NRS4 437 aa12.26□□□□□ -0.45
TNC-209ENST00000534839 GNL3LQ9NVN8 582 aaKnown RBP12.26□□□□□ -0.45
TNC-209ENST00000534839 RBAK-RBAKDNI3L0D1 243 aa12.25□□□□□ -0.45
TNC-209ENST00000534839 EYA4O95677 639 aa12.25□□□□□ -0.45
TNC-209ENST00000534839 SUPT20HL2P0C7V6 817 aa12.25□□□□□ -0.45
TNC-209ENST00000534839 GNAI1P63096 354 aa12.25□□□□□ -0.45
TNC-209ENST00000534839 SH3RF3Q8TEJ3 882 aaPredicted RBP12.25□□□□□ -0.45
TNC-209ENST00000534839 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNC-209ENST00000534839 MSLNLQ96KJ4 702 aa12.25□□□□□ -0.45
TNC-209ENST00000534839 RPGRIP1Q96KN7 1286 aa12.25□□□□□ -0.45
TNC-209ENST00000534839 TANC1Q9C0D5 1861 aa12.25□□□□□ -0.45
TNC-209ENST00000534839 CEP250Q9BV73 2442 aa12.25□□□□□ -0.45
TNC-209ENST00000534839 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.24□□□□□ -0.45
TNC-209ENST00000534839 DCDC2BA2VCK2 349 aa12.24□□□□□ -0.45
TNC-209ENST00000534839 F6X3S4 739 aa12.24□□□□□ -0.45
TNC-209ENST00000534839 ERVH48-1M5A8F1 160 aa12.24□□□□□ -0.45
TNC-209ENST00000534839 PTGS1P23219 599 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms