RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PHOSPHO2Q8TCD6 241 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 SEZ6LQ9BYH1 1024 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 KCNH6Q9H252 994 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 UBE2ZQ9H832 354 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 SCN10AQ9Y5Y9 1956 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 TNKSO95271 1327 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 COL4A4P53420 1690 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 DYNC1LI2O43237 492 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 CYP21A2P08686 494 aa11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 KCNA5P22460 613 aa11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 IRX6P78412 446 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 ASPRV1Q53RT3 343 aa11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 KIAA1211Q6ZU35 1233 aa11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 CYB5R4Q7L1T6 521 aa11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 TBC1D5Q92609 795 aa11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 MTMR8Q96EF0 704 aa11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 FTOQ9C0B1 505 aaKnown RBP eCLIP11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 ALDH8A1Q9H2A2 487 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 TRMT13Q9NUP7 481 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 BAZ2BQ9UIF8 2168 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-203ENST00000534830 SGSM2O43147 1006 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 DCXO43602 365 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 SUPT20HL2P0C7V6 817 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 IL9P15248 144 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 CALML3P27482 149 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 FOXK2Q01167 660 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 CDC37Q16543 378 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 LEXMQ3ZCV2 418 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 STAG2Q8N3U4 1231 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 RUFY2Q8WXA3 655 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 WDR11Q9BZH6 1224 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 JMJD4Q9H9V9 463 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 MYH7BA7E2Y1 1941 aa11.75□□□□□ -0.53
CLSTN3-203ENST00000534830 CACNA1AO00555 2505 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 NKRFO15226 690 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 PARP1P09874 1014 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 GHRHRQ02643 423 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 QRICH1Q2TAL8 776 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 USH1GQ495M9 461 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 MAP4K1Q92918 833 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 LMCD1Q9NZU5 365 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 COL20A1Q9P218 1284 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 MTUS1Q9ULD2 1270 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 TAF6LQ9Y6J9 622 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 ABCB11O95342 1321 aa11.74□□□□□ -0.53
CLSTN3-203ENST00000534830 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 LCHNA4D1U4 455 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 OPLAHO14841 1288 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 RFC2P35250 354 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 KCNJ6P48051 423 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 PURAQ00577 322 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 STOX1Q6ZVD7 989 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 TET1Q8NFU7 2136 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 SYTL5Q8TDW5 730 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 TAAR1Q96RJ0 339 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 PHOX2BQ99453 314 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 UBAC1Q9BSL1 405 aa11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-203ENST00000534830 GRXCR2A6NFK2 248 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 E7EWF7 191 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 PPP1R11O60927 126 aaPredicted RBP11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 ARIH2O95376 493 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 PDE4DQ08499 809 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 FAM47CQ5HY64 1035 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 HFE2Q6ZVN8 426 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 IGDCC4Q8TDY8 1250 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 SCFD2Q8WU76 684 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 IWS1Q96ST2 819 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 RIOX1Q9H6W3 641 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 SUGCTQ9HAC7 445 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 SENP2Q9HC62 589 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 MRPL11Q9Y3B7 192 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 ZNF318Q5VUA4 2279 aa11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
CLSTN3-203ENST00000534830 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 A6NJR5 290 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 B4DLN1 442 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 KLRF2D3W0D1 207 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 ZBTB5O15062 677 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 ST18O60284 1047 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 IQCF3P0C7M6 154 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 CPT1AP50416 773 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 HSD17B4P51659 736 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 MRPL12P52815 198 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 ANTXR2P58335 489 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 TROAPQ12815 778 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 TRDNQ13061 729 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms