RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 ARNTL2Q8WYA1 636 aa16.22■□□□□ 0.19
CCDC84-208ENST00000534656 OSBPL3Q9H4L5 887 aa16.22■□□□□ 0.19
CCDC84-208ENST00000534656 ZSWIM5Q9P217 1185 aa16.22■□□□□ 0.19
CCDC84-208ENST00000534656 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
CCDC84-208ENST00000534656 XIRP2A4UGR9 3374 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 B4E1Z4 1266 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 TLL1O43897 1013 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 PARNO95453 639 aaKnown RBP16.21■□□□□ 0.19
CCDC84-208ENST00000534656 SELPP16109 830 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 KCNJ6P48051 423 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 RBL2Q08999 1139 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 DGKDQ16760 1214 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 ARHGEF16Q5VV41 709 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 CWC27Q6UX04 472 aaKnown RBP16.21■□□□□ 0.19
CCDC84-208ENST00000534656 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 ENAHQ8N8S7 591 aaPredicted RBP16.21■□□□□ 0.19
CCDC84-208ENST00000534656 DHX38Q92620 1227 aaKnown RBP16.21■□□□□ 0.19
CCDC84-208ENST00000534656 EMID1Q96A84 441 aaPredicted RBP16.21■□□□□ 0.19
CCDC84-208ENST00000534656 JMJD4Q9H9V9 463 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 DDX41Q9UJV9 622 aaKnown RBP16.21■□□□□ 0.19
CCDC84-208ENST00000534656 MYO9BQ13459 2157 aa16.21■□□□□ 0.19
CCDC84-208ENST00000534656 TRANK1O15050 2925 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
CCDC84-208ENST00000534656 EIF3JO75822 258 aaKnown RBP16.2■□□□□ 0.18
CCDC84-208ENST00000534656 NR3C2P08235 984 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 PARP1P09874 1014 aaKnown RBP16.2■□□□□ 0.18
CCDC84-208ENST00000534656 EIF2AK2P19525 551 aaKnown RBP16.2■□□□□ 0.18
CCDC84-208ENST00000534656 KCNQ1P51787 676 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 WDR5P61964 334 aaKnown RBP16.2■□□□□ 0.18
CCDC84-208ENST00000534656 AAMPQ13685 434 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 KRT40Q6A162 431 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 LRRC8DQ7L1W4 858 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 CHD1LQ86WJ1 897 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 NECAB3Q96P71 396 aaPredicted RBP16.2■□□□□ 0.18
CCDC84-208ENST00000534656 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 RWDD1Q9H446 243 aaPredicted RBP16.2■□□□□ 0.18
CCDC84-208ENST00000534656 DIAPH3Q9NSV4 1193 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 COG5Q9UP83 839 aa16.2■□□□□ 0.18
CCDC84-208ENST00000534656 CFBP00751 764 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 CXCL10P02778 98 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 CKBP12277 381 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 PSEN2P49810 448 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 GRB10Q13322 594 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 LAMC2Q13753 1193 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
CCDC84-208ENST00000534656 CNKSR3Q6P9H4 555 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 C7orf31Q8N865 590 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 ALG1Q9BT22 464 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 KATNAL1Q9BW62 490 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 KRT23Q9C075 422 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 MRVI1Q9Y6F6 885 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
CCDC84-208ENST00000534656 HAS3O00219 553 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 HIP1O00291 1037 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 OPLAHO14841 1288 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 NBNO60934 754 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 HSD17B4P51659 736 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 GHRHRQ02643 423 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 NUCB1Q02818 461 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 PTK7Q13308 1070 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 MFSD10Q14728 455 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 SPRED2Q7Z698 418 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
CCDC84-208ENST00000534656 PPTC7Q8NI37 304 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 ZBED2Q9BTP6 218 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 AMNQ9BXJ7 453 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 CNNM2Q9H8M5 875 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 CTNNA3Q9UI47 895 aa16.18■□□□□ 0.18
CCDC84-208ENST00000534656 KIAA1217Q5T5P2 1943 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 ABHD14A-ACY1A0A1B0GW23 586 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 LCHNA4D1U4 455 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 LPXNO60711 386 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 F2P00734 622 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 DEFB103AP81534 67 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 KIAA0753Q2KHM9 967 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 TMCO2Q7Z6W1 182 aaPredicted RBP16.17■□□□□ 0.18
CCDC84-208ENST00000534656 STAG2Q8N3U4 1231 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 UBAC1Q9BSL1 405 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 MAP3K20Q9NYL2 800 aaKnown RBP16.17■□□□□ 0.18
CCDC84-208ENST00000534656 RAPGEFL1Q9UHV5 662 aa16.17■□□□□ 0.18
CCDC84-208ENST00000534656 TET1Q8NFU7 2136 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 PTPRSQ13332 1948 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 RGS20O76081 388 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 IGHDP01880 384 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 ZNF286BP0CG31 522 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 HOXD8P13378 290 aaPredicted RBP16.16■□□□□ 0.18
CCDC84-208ENST00000534656 TCTN1Q2MV58 587 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 TRIM71Q2Q1W2 868 aaKnown RBP16.16■□□□□ 0.18
CCDC84-208ENST00000534656 IFIT1BQ5T764 474 aaKnown RBP16.16■□□□□ 0.18
CCDC84-208ENST00000534656 KCNV1Q6PIU1 500 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 STOX1Q6ZVD7 989 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 HLA-CQ95604 372 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 RAD9AQ99638 391 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 PDCD2LQ9BRP1 358 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms