RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 PHF20Q9BVI0 1012 aa27.67■■■□□ 2.02
SIPA1-210ENST00000534406 OGDHLQ9ULD0 1010 aa27.67■■■□□ 2.02
SIPA1-210ENST00000534406 KCNJ14Q9UNX9 436 aa27.67■■■□□ 2.02
SIPA1-210ENST00000534406 RBM47A0AV96 593 aaKnown RBP27.66■■■□□ 2.02
SIPA1-210ENST00000534406 ADAMTS3O15072 1205 aa27.66■■■□□ 2.02
SIPA1-210ENST00000534406 STAM2O75886 525 aa27.66■■■□□ 2.02
SIPA1-210ENST00000534406 TNFAIP2Q03169 654 aa27.66■■■□□ 2.02
SIPA1-210ENST00000534406 TRIM29Q14134 588 aa27.66■■■□□ 2.02
SIPA1-210ENST00000534406 IQSEC1Q6DN90 963 aa27.66■■■□□ 2.02
SIPA1-210ENST00000534406 FAM184AQ8NB25 1140 aa27.66■■■□□ 2.02
SIPA1-210ENST00000534406 RASGRP4Q8TDF6 673 aa27.66■■■□□ 2.02
SIPA1-210ENST00000534406 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.65■■■□□ 2.02
SIPA1-210ENST00000534406 ADCY6O43306 1168 aa27.65■■■□□ 2.02
SIPA1-210ENST00000534406 DUSP11O75319 330 aaKnown RBP27.65■■■□□ 2.02
SIPA1-210ENST00000534406 CAPN15O75808 1086 aa27.65■■■□□ 2.02
SIPA1-210ENST00000534406 EN2P19622 333 aaPredicted RBP27.65■■■□□ 2.02
SIPA1-210ENST00000534406 SEPT14Q6ZU15 432 aa27.65■■■□□ 2.02
SIPA1-210ENST00000534406 BLIDQ8IZY5 108 aa27.65■■■□□ 2.02
SIPA1-210ENST00000534406 WDR11Q9BZH6 1224 aa27.65■■■□□ 2.02
SIPA1-210ENST00000534406 XPNPEP3Q9NQH7 507 aa27.65■■■□□ 2.02
SIPA1-210ENST00000534406 GJB4Q9NTQ9 266 aa27.65■■■□□ 2.02
SIPA1-210ENST00000534406 SREBF1P36956 1147 aa27.64■■■□□ 2.02
SIPA1-210ENST00000534406 FOSBP53539 338 aa27.64■■■□□ 2.02
SIPA1-210ENST00000534406 MRPS9P82933 396 aaKnown RBP27.64■■■□□ 2.02
SIPA1-210ENST00000534406 TTLL4Q14679 1199 aa27.64■■■□□ 2.02
SIPA1-210ENST00000534406 NPY5RQ15761 445 aa27.64■■■□□ 2.02
SIPA1-210ENST00000534406 GNPTABQ3T906 1256 aa27.64■■■□□ 2.02
SIPA1-210ENST00000534406 KIF3AQ9Y496 699 aa27.64■■■□□ 2.02
SIPA1-210ENST00000534406 MYH7BA7E2Y1 1941 aa27.63■■■□□ 2.01
SIPA1-210ENST00000534406 K7ELQ4 463 aaPredicted RBP27.63■■■□□ 2.01
SIPA1-210ENST00000534406 SMPD1P17405 629 aa27.63■■■□□ 2.01
SIPA1-210ENST00000534406 SNX21Q969T3 373 aa27.63■■■□□ 2.01
SIPA1-210ENST00000534406 INPP4AQ96PE3 977 aaPredicted RBP27.63■■■□□ 2.01
SIPA1-210ENST00000534406 SYNRGQ9UMZ2 1314 aa27.63■■■□□ 2.01
SIPA1-210ENST00000534406 ARHGAP4P98171 946 aa27.62■■■□□ 2.01
SIPA1-210ENST00000534406 DUSP28Q4G0W2 176 aa27.62■■■□□ 2.01
SIPA1-210ENST00000534406 TLK2Q86UE8 772 aa27.62■■■□□ 2.01
SIPA1-210ENST00000534406 ANKLE1Q8NAG6 615 aa27.62■■■□□ 2.01
SIPA1-210ENST00000534406 BRMS1Q9HCU9 246 aa27.62■■■□□ 2.01
SIPA1-210ENST00000534406 GNEQ9Y223 722 aaKnown RBP27.62■■■□□ 2.01
SIPA1-210ENST00000534406 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.62■■■□□ 2.01
SIPA1-210ENST00000534406 MRVI1Q9Y6F6 885 aa27.62■■■□□ 2.01
SIPA1-210ENST00000534406 NKRFO15226 690 aaKnown RBP eCLIP27.61■■■□□ 2.01
SIPA1-210ENST00000534406 RGS20O76081 388 aa27.61■■■□□ 2.01
SIPA1-210ENST00000534406 TXNP10599 105 aaKnown RBP27.61■■■□□ 2.01
SIPA1-210ENST00000534406 CUL4AQ13619 759 aa27.61■■■□□ 2.01
SIPA1-210ENST00000534406 HSCBQ8IWL3 235 aa27.61■■■□□ 2.01
SIPA1-210ENST00000534406 ZFP91Q96JP5 570 aaPredicted RBP27.61■■■□□ 2.01
SIPA1-210ENST00000534406 C8orf76Q96K31 380 aa27.61■■■□□ 2.01
SIPA1-210ENST00000534406 SPC25Q9HBM1 224 aa27.61■■■□□ 2.01
SIPA1-210ENST00000534406 M0R2N6 131 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 FARP2O94887 1054 aaPredicted RBP27.6■■■□□ 2.01
SIPA1-210ENST00000534406 ARIH2O95376 493 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 PGK1P00558 417 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 GJC2Q5T442 439 aaPredicted RBP27.6■■■□□ 2.01
SIPA1-210ENST00000534406 KRT40Q6A162 431 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 CCDC62Q6P9F0 684 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 KCNV1Q6PIU1 500 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 ARRDC4Q8NCT1 418 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 UPF3AQ9H1J1 476 aaKnown RBP27.6■■■□□ 2.01
SIPA1-210ENST00000534406 RTEL1Q9NZ71 1219 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 SMC3Q9UQE7 1217 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 Q9Y3F1 56 aa27.6■■■□□ 2.01
SIPA1-210ENST00000534406 ADAMTS4O75173 837 aa27.59■■■□□ 2.01
SIPA1-210ENST00000534406 MMP1P03956 469 aa27.59■■■□□ 2.01
SIPA1-210ENST00000534406 MYCNP04198 464 aaPredicted RBP27.59■■■□□ 2.01
SIPA1-210ENST00000534406 KRT2P35908 639 aa27.59■■■□□ 2.01
SIPA1-210ENST00000534406 KRT25Q7Z3Z0 450 aa27.59■■■□□ 2.01
SIPA1-210ENST00000534406 RNF180Q86T96 592 aa27.59■■■□□ 2.01
SIPA1-210ENST00000534406 NLRX1Q86UT6 975 aa27.59■■■□□ 2.01
SIPA1-210ENST00000534406 AP5M1Q9H0R1 490 aa27.59■■■□□ 2.01
SIPA1-210ENST00000534406 DNM1LO00429 736 aa27.58■■■□□ 2.01
SIPA1-210ENST00000534406 FIBPO43427 364 aa27.58■■■□□ 2.01
SIPA1-210ENST00000534406 GJA9P57773 515 aa27.58■■■□□ 2.01
SIPA1-210ENST00000534406 LRRC41Q15345 812 aa27.58■■■□□ 2.01
SIPA1-210ENST00000534406 TMEM63BQ5T3F8 832 aa27.58■■■□□ 2.01
SIPA1-210ENST00000534406 CRYGNQ8WXF5 182 aa27.58■■■□□ 2.01
SIPA1-210ENST00000534406 GPRASP2Q96D09 838 aa27.58■■■□□ 2.01
SIPA1-210ENST00000534406 UBIAD1Q9Y5Z9 338 aa27.58■■■□□ 2.01
SIPA1-210ENST00000534406 MKI67P46013 3256 aaKnown RBP27.57■■■□□ 2
SIPA1-210ENST00000534406 KBTBD13C9JR72 458 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 DYNC1LI2O43237 492 aaPredicted RBP27.57■■■□□ 2
SIPA1-210ENST00000534406 C6orf222P0C671 652 aaPredicted RBP27.57■■■□□ 2
SIPA1-210ENST00000534406 TGFB3P10600 412 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 ITGB5P18084 799 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 PTGS1P23219 599 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 GJB2P29033 226 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 ICAM3P32942 547 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 GUCY1B3Q02153 619 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 NONOQ15233 471 aaKnown RBP eCLIP27.57■■■□□ 2
SIPA1-210ENST00000534406 LY6KQ17RY6 165 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 OR6J1Q8NGC5 347 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 OXER1Q8TDS5 423 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 CDHR1Q96JP9 859 aa27.57■■■□□ 2
SIPA1-210ENST00000534406 DDX41Q9UJV9 622 aaKnown RBP27.57■■■□□ 2
SIPA1-210ENST00000534406 CCDC194A0A1B0GVG4 234 aa27.56■■■□□ 2
SIPA1-210ENST00000534406 GH1P01241 217 aa27.56■■■□□ 2
SIPA1-210ENST00000534406 CYP3A4P08684 503 aa27.56■■■□□ 2
SIPA1-210ENST00000534406 CST5P28325 142 aaPredicted RBP27.56■■■□□ 2
SIPA1-210ENST00000534406 ZNF76P36508 570 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms