RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 FGBP02675 491 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 CALM1P0DP23 149 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 CALM2P0DP24 149 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 CALM3P0DP25 149 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 ARHGAP1Q07960 439 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 LAMC2Q13753 1193 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 RNF20Q5VTR2 975 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 ZNF654Q8IZM8 581 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 AFG1LQ8WV93 481 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 MRVI1Q9Y6F6 885 aa15.51■□□□□ 0.07
CAPN1-228ENST00000534373 SCN10AQ9Y5Y9 1956 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 CCDC69A6NI79 296 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 STAM2O75886 525 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 PFKMP08237 780 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 MMP3P08254 477 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 PGM5Q15124 567 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 DGKDQ16760 1214 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 CREB3L3Q68CJ9 461 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 SESTD1Q86VW0 696 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 RRP36Q96EU6 259 aaKnown RBP15.5■□□□□ 0.07
CAPN1-228ENST00000534373 FAM161BQ96MY7 647 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 ANO2Q9NQ90 1003 aa15.5■□□□□ 0.07
CAPN1-228ENST00000534373 TRMT13Q9NUP7 481 aaKnown RBP15.5■□□□□ 0.07
CAPN1-228ENST00000534373 KIAA1217Q5T5P2 1943 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-228ENST00000534373 PPFIA4O75335 1185 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 ACRP10323 421 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 MYCLP12524 364 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-228ENST00000534373 CCND2P30279 289 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 HOXA13P31271 388 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-228ENST00000534373 RFC2P35250 354 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 CCL23P55773 120 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 NFXL1Q6ZNB6 911 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 DHX37Q8IY37 1157 aaKnown RBP15.49■□□□□ 0.07
CAPN1-228ENST00000534373 PPTC7Q8NI37 304 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 CDX2Q99626 313 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-228ENST00000534373 KATNAL1Q9BW62 490 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 WNT8AQ9H1J5 351 aa15.49■□□□□ 0.07
CAPN1-228ENST00000534373 TTYH1Q9H313 450 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-228ENST00000534373 UMODL1Q5DID0 1318 aa15.48■□□□□ 0.07
CAPN1-228ENST00000534373 RGS20O76081 388 aa15.48■□□□□ 0.07
CAPN1-228ENST00000534373 DNAJB2P25686 324 aa15.48■□□□□ 0.07
CAPN1-228ENST00000534373 BFSP2Q13515 415 aa15.48■□□□□ 0.07
CAPN1-228ENST00000534373 TSGA10IPQ3SY00 556 aa15.48■□□□□ 0.07
CAPN1-228ENST00000534373 SGMS1Q86VZ5 419 aa15.48■□□□□ 0.07
CAPN1-228ENST00000534373 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
CAPN1-228ENST00000534373 SEC63Q9UGP8 760 aaKnown RBP15.48■□□□□ 0.07
CAPN1-228ENST00000534373 SLC12A7Q9Y666 1083 aa15.48■□□□□ 0.07
CAPN1-228ENST00000534373 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
CAPN1-228ENST00000534373 PIK3CDO00329 1044 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 CYP2C9P11712 490 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 HOXD8P13378 290 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-228ENST00000534373 GNPTABQ3T906 1256 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 CELF3Q5SZQ8 465 aaKnown RBP15.47■□□□□ 0.07
CAPN1-228ENST00000534373 MYSM1Q5VVJ2 828 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 XRRA1Q6P2D8 792 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 FCHSD1Q86WN1 690 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 KAT2BQ92831 832 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 CUL5Q93034 780 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 NOD1Q9Y239 953 aa15.47■□□□□ 0.07
CAPN1-228ENST00000534373 FRMPD4Q14CM0 1322 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 IQCF3P0C7M6 154 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 ICAM3P32942 547 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 RAB30Q15771 203 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 PTGISQ16647 500 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 SYNE3Q6ZMZ3 975 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 SRBD1Q8N5C6 995 aaKnown RBP15.46■□□□□ 0.07
CAPN1-228ENST00000534373 CCDC155Q8N6L0 562 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 FANCBQ8NB91 859 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 CAGE1Q8TC20 777 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 TIFAQ96CG3 184 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 NEK1Q96PY6 1258 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 MYL10Q9BUA6 226 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 ZNF576Q9H609 170 aa15.46■□□□□ 0.07
CAPN1-228ENST00000534373 CDH23Q9H251 3354 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 HAS3O00219 553 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 CDC45O75419 566 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 PARNO95453 639 aaKnown RBP15.45■□□□□ 0.06
CAPN1-228ENST00000534373 F2P00734 622 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 ACTN1P12814 892 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 KRT32Q14532 448 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 OTOP2Q7RTS6 562 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 TEX2Q8IWB9 1127 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 IL31RAQ8NI17 732 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 VWCEQ96DN2 955 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 SCLYQ96I15 445 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 SPATA33Q96N06 139 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 INPP4AQ96PE3 977 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-228ENST00000534373 PBX4Q9BYU1 374 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 MLXIPQ9HAP2 919 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 CXXC1Q9P0U4 656 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-228ENST00000534373 GTF2IRD1Q9UHL9 959 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 MSRAQ9UJ68 235 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 SLC4A7Q9Y6M7 1214 aa15.45■□□□□ 0.06
CAPN1-228ENST00000534373 MEIS2O14770 477 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 GGPS1O95749 300 aa15.44■□□□□ 0.06
CAPN1-228ENST00000534373 HMGB1P09429 215 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms