RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 PHOSPHO2Q8TCD6 241 aa19.67■□□□□ 0.74
CAPRIN1-216ENST00000534042 TSPYL2Q9H2G4 693 aaPredicted RBP19.67■□□□□ 0.74
CAPRIN1-216ENST00000534042 CNNM2Q9H8M5 875 aa19.67■□□□□ 0.74
CAPRIN1-216ENST00000534042 CA3P07451 260 aa19.66■□□□□ 0.74
CAPRIN1-216ENST00000534042 IFIT1BQ5T764 474 aaKnown RBP19.66■□□□□ 0.74
CAPRIN1-216ENST00000534042 SESTD1Q86VW0 696 aa19.66■□□□□ 0.74
CAPRIN1-216ENST00000534042 MICALL1Q8N3F8 863 aa19.66■□□□□ 0.74
CAPRIN1-216ENST00000534042 IL27Q8NEV9 243 aa19.66■□□□□ 0.74
CAPRIN1-216ENST00000534042 CAGE1Q8TC20 777 aa19.66■□□□□ 0.74
CAPRIN1-216ENST00000534042 BAZ2BQ9UIF8 2168 aaKnown RBP19.66■□□□□ 0.74
CAPRIN1-216ENST00000534042 KIF28PB7ZC32 967 aa19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 EIF3JO75822 258 aaKnown RBP19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 CFBP00751 764 aa19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 NR3C2P08235 984 aa19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 EIF2AK2P19525 551 aaKnown RBP19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 DGKDQ16760 1214 aa19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 GDF6Q6KF10 455 aaPredicted RBP19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 AFAP1L1Q8TED9 768 aa19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 KAT2BQ92831 832 aa19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 AMNQ9BXJ7 453 aa19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 DDX41Q9UJV9 622 aaKnown RBP19.65■□□□□ 0.74
CAPRIN1-216ENST00000534042 HERC6Q8IVU3 1022 aa19.64■□□□□ 0.73
CAPRIN1-216ENST00000534042 STAG2Q8N3U4 1231 aa19.64■□□□□ 0.73
CAPRIN1-216ENST00000534042 EXOC6Q8TAG9 804 aa19.64■□□□□ 0.73
CAPRIN1-216ENST00000534042 PXMP2Q9NR77 195 aa19.64■□□□□ 0.73
CAPRIN1-216ENST00000534042 MRVI1Q9Y6F6 885 aa19.64■□□□□ 0.73
CAPRIN1-216ENST00000534042 TCF20Q9UGU0 1960 aaKnown RBP19.64■□□□□ 0.73
CAPRIN1-216ENST00000534042 CHD7Q9P2D1 2997 aa19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 KLRF2D3W0D1 207 aa19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 RFXAPO00287 272 aa19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 GTPBP6O43824 516 aaPredicted RBP19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 BAIAP3O94812 1187 aa19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 KCNJ6P48051 423 aa19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 LAMC2Q13753 1193 aa19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 ADAMTS19Q8TE59 1207 aa19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 EMID1Q96A84 441 aaPredicted RBP19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 CERS4Q9HA82 394 aa19.63■□□□□ 0.73
CAPRIN1-216ENST00000534042 SELPP16109 830 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 PSEN2P49810 448 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 HSD17B4P51659 736 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 SEC23AQ15436 765 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 LRRC8DQ7L1W4 858 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 DHX37Q8IY37 1157 aaKnown RBP19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 C7orf31Q8N865 590 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 YTHDC1Q96MU7 727 aaKnown RBP19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 CTAGE1Q96RT6 745 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 ALG1Q9BT22 464 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 KATNAL1Q9BW62 490 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 MAP3K20Q9NYL2 800 aaKnown RBP19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 HDAC6Q9UBN7 1215 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 GTF2IRD1Q9UHL9 959 aa19.62■□□□□ 0.73
CAPRIN1-216ENST00000534042 OPLAHO14841 1288 aa19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 ZBTB5O15062 677 aa19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 PARNO95453 639 aaKnown RBP19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 MYCLP12524 364 aaPredicted RBP19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 POU3F3P20264 500 aaPredicted RBP19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 TAP1Q03518 808 aa19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 SKIV2LQ15477 1246 aaKnown RBP19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 CYB5R4Q7L1T6 521 aa19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 PPTC7Q8NI37 304 aa19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 DHX38Q92620 1227 aaKnown RBP19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 MTMR8Q96EF0 704 aa19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 PCDHA1Q9Y5I3 950 aa19.61■□□□□ 0.73
CAPRIN1-216ENST00000534042 TLL1O43897 1013 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 GHRHRQ02643 423 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 RBL2Q08999 1139 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 TRDNQ13061 729 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 MFSD10Q14728 455 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 KIAA0753Q2KHM9 967 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 KCNV1Q6PIU1 500 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 SAMD3Q8N6K7 520 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 ARNTL2Q8WYA1 636 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 UHRF1Q96T88 793 aaPredicted RBP19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 PDCD2LQ9BRP1 358 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 IL25Q9H293 177 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 MTCH2Q9Y6C9 303 aa19.6■□□□□ 0.73
CAPRIN1-216ENST00000534042 PALM3A6NDB9 673 aaPredicted RBP19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 EPOPA6NHQ4 379 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 PPP1R11O60927 126 aaPredicted RBP19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 ARHGEF15O94989 841 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 F2P00734 622 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 ZNF286BP0CG31 522 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 CKBP12277 381 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 WDR5P61964 334 aaKnown RBP19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 TRAF1Q13077 416 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 GPNMBQ14956 572 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 AAK1Q2M2I8 961 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 CNKSR3Q6P9H4 555 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 STOX1Q6ZVD7 989 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 PTPRSQ13332 1948 aa19.59■□□□□ 0.73
CAPRIN1-216ENST00000534042 HAS3O00219 553 aa19.58■□□□□ 0.72
CAPRIN1-216ENST00000534042 PPFIA4O75335 1185 aa19.58■□□□□ 0.72
CAPRIN1-216ENST00000534042 HOXA13P31271 388 aaPredicted RBP19.58■□□□□ 0.72
CAPRIN1-216ENST00000534042 PTK7Q13308 1070 aa19.58■□□□□ 0.72
CAPRIN1-216ENST00000534042 MYSM1Q5VVJ2 828 aa19.58■□□□□ 0.72
CAPRIN1-216ENST00000534042 HOMER1Q86YM7 354 aa19.58■□□□□ 0.72
CAPRIN1-216ENST00000534042 ZBED2Q9BTP6 218 aa19.58■□□□□ 0.72
CAPRIN1-216ENST00000534042 SPTBN5Q9NRC6 3674 aaKnown RBP19.57■□□□□ 0.72
CAPRIN1-216ENST00000534042 ERICH2A1L162 156 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms